ggKbase home page

PLM3_60_coex_sep16_scaffold_169_18

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 19715..21853

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel Tax=Microvirga sp. WSM3557 RepID=I4YYT0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 698.0
  • Bit_score: 746
  • Evalue 1.70e-212
Mechanosensitive ion channel protein {ECO:0000313|EMBL:EWY38704.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 677.0
  • Bit_score: 761
  • Evalue 5.50e-217
mechanosensitive ion channel MscS-like protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 717.0
  • Bit_score: 682
  • Evalue 8.60e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2139
ATGAGTCTCGGCCTTGATCGGACAATCGTGAATCGAGCCCGTTTCATATCCGCTGCCGGCGCACTCGCGGCGGCGATCCTGCTGTTCGCGCTGTCGGCGCATATGGCCGCGGCGCAGGAAGCCGCGCCGGCCGCCGATCCTCCCGCAAAAGTGCAGGAGCTGCTGCAGCTGCTCGACGATCCCGCGGTGCGCGACTGGCTGACACAGCACCAGGCCGCCACAGCACCGCCGCCCGCACCGCCAGCGGAGACCGCAACGGCACCGTCGAGCTATTTCGCCGGCCGCGTCGCCGCGATCCGCGCCCATGTGACGGCGCTGGGCGCCGCGCTGCCGCAACTGCCGGAGGAGTTCGAGCGGGCCGGTATCATCCTGTCGCTCGAGTTTCAGGAGCGCGGCCTGTTCACCATCCTGCTGCTGTTCGCCGTCTTCGTCGGTCTCGGCTTCGGCACCGAGTGGTTGTTCCGCTGGGTCACGCGCGGCCTGCAGCAGTGGATCATCCACGTGCCCTTGGACACGGTCGGCCAGCGCATGCGCGCCGTCGCTATCCGGCTTGGCTTTGGCCTTGGGCTCATCGCGTCTTTCGCCATCGGCAGCGTCGGCGGTTTCCTCGCGTTCGACTGGCCGCCGCTGCTGCGCGAGGTCGTGCTCGGCTATCTGCTGGCCTTCCTCGTGCTGCGGCTGACACTCGTCGCCGGGCGGTTCCTGCTGGCGCCGGGTGGCGAGCGCTTCCGCGTCCTGCCGATGTCCACGCCGGCGGCGTGGTTCTGGTACCGGCGGATGGGGATGTTCGTCGGCTGGCTGGCCTTCGGCTGGGTGACGGTCGGGTTTCTCGGCACCCTCGGCATGGACCCCGATGTGCGGCGCATCGTTGCGTATACACTGGGTCTGGTCCTGCTGGGCATCGCCGTCGAATCCGTCTGGCGGCGGCCGGCCGAAACGAAGTCCCGCGCCGCCGCCTGGCTGCTGTCGGTTTATTTCGTCATCCTGTGGCTGCTCTGGGTCGCCAGCGCCATGGCCAGCTTCTGGCTCCTGCTGGTGGCGCTCGGCTTGCCGGTGATGCTGCGGGGAACCCAGCGCGCCGTCGATCATCTGCTGCGGCCGCCGGGCGCCGCCGTCCAGGCGGAAGCAGGCCCCGGCGTCATCGCCGCCTCGCTGGCGCGCGCCTTGCGCGCCCTCATCATCATCGGCGCCGCACTGCTGCTGGCCTGGGCTTGGCAGGTCGATCTCGGCGAACTGACCGCGCGCGACACCATCGCGACCCGCCTGCTACGCGGAGCGCTCAACGTGGTGCTCATCGTGCTGATCGCCGATTTCGCCTGGCATGTGCTGAAGGCGCTGATCGACCGCAAACTCGAGGAGGCGCGCGCCGGCGGTCAGCCCGACAACGAGGAATCGCGGCGGCGGGCGCGCCTGCGCACCCTGCTGCCGATTACGCGCAACGGGCTGTTCGCCGTGCTGCTGGTCATGACGCTGCTGATGGCGCTGTCGGCCGTCGGCATCGAGATCGGTCCGCTGATCGCCGGCGCCGGCGTGGTCGGCGTCGCCATCGGCTTCGGCGCGCAGACCCTGGTCAAGGACGTCATCAGCGGCATGTTCTACTTGCTCGATGACGCCTTCCGCACCGGCGAATACATCCAGAGCGGCAGCTATAAGGGCACCGTCGAATCCTTCAGCCTCCGCTCGGTCAAGCTCAGGCATCACCGCGGGCCGCTCTACACCGTGCCGTTCGGCGAGCTTGGCGCGGTCCAGAACATGAGCCGCGACTGGGTGATCGACAAGGTGACCGTCGGCGTCACCTACGACAGCGATCTCGAAAAGGCGAAGAAGCTGATCAAGCAGATCGGCAAGGAACTGGCGGCCGATCCGGAATACGCACCCAACATCATCGAGACGCTGAAGATGCAGGGCGTCGAGCAGTTCGGCGACTACGCCATCCAACTCCGCATGAAGATGATGACCAAGCCGGGCGAGCAGTTCGTCATCCGCCGCAAGGCCTATGCCATGATCAAGAAAGCCTTCGACGAGAACTGCATCCGCTTCGCTACGCCGACCGTCACGGTGGCCGGTGGCGATGCCGACACCGCCGCCGCGGCGCAGAAGGCGATCGAAGCCGCCCGCCCGCCGGCACCGGCGGCGTAG
PROTEIN sequence
Length: 713
MSLGLDRTIVNRARFISAAGALAAAILLFALSAHMAAAQEAAPAADPPAKVQELLQLLDDPAVRDWLTQHQAATAPPPAPPAETATAPSSYFAGRVAAIRAHVTALGAALPQLPEEFERAGIILSLEFQERGLFTILLLFAVFVGLGFGTEWLFRWVTRGLQQWIIHVPLDTVGQRMRAVAIRLGFGLGLIASFAIGSVGGFLAFDWPPLLREVVLGYLLAFLVLRLTLVAGRFLLAPGGERFRVLPMSTPAAWFWYRRMGMFVGWLAFGWVTVGFLGTLGMDPDVRRIVAYTLGLVLLGIAVESVWRRPAETKSRAAAWLLSVYFVILWLLWVASAMASFWLLLVALGLPVMLRGTQRAVDHLLRPPGAAVQAEAGPGVIAASLARALRALIIIGAALLLAWAWQVDLGELTARDTIATRLLRGALNVVLIVLIADFAWHVLKALIDRKLEEARAGGQPDNEESRRRARLRTLLPITRNGLFAVLLVMTLLMALSAVGIEIGPLIAGAGVVGVAIGFGAQTLVKDVISGMFYLLDDAFRTGEYIQSGSYKGTVESFSLRSVKLRHHRGPLYTVPFGELGAVQNMSRDWVIDKVTVGVTYDSDLEKAKKLIKQIGKELAADPEYAPNIIETLKMQGVEQFGDYAIQLRMKMMTKPGEQFVIRRKAYAMIKKAFDENCIRFATPTVTVAGGDADTAAAAQKAIEAARPPAPAA*