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PLM3_60_coex_sep16_scaffold_6142_11

Organism: PLM3_60_coex_sep16_Aeromicrobium_marinum_64_8

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(8086..9873)

Top 3 Functional Annotations

Value Algorithm Source
Putative collagen-binding protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHY2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 574.0
  • Bit_score: 228
  • Evalue 1.30e-56
collagen-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 574.0
  • Bit_score: 228
  • Evalue 3.70e-57
Putative collagen-binding protein {ECO:0000313|EMBL:AGA28857.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 574.0
  • Bit_score: 228
  • Evalue 1.80e-56

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1788
GTGCTGCGTACGCTTTTGCGCTCAACGGCCGCCTTGGCGGGACTCATCACATGGGTGACCGTGGCGGTATTGCCGGTTCCGGCAGACGCCGAGACGACTGACGGCACTTTGACGGTGATTGTCGACCGCGACGTCAACGGCAATGGAAACTACGACGGCACCGTCGACCAGCCACAGCCCGGCATCGAGATTGCGGTAACCGACGCCAGTGGACACCGCGTCAAGGGTGTCACGGAGCGTGACGGCAGATTCGTCCTTGCGGCAACGAGCAAGCTCAACGGTGGCCGGTATTTCGTCGTCGCCGAGATTCCCGCACCGCTCTCTGATCTCACGCCGGTTCCCGAAAGCAGCACATTCCAGCCGTTGAGCACGACGGTCGACGTGACGTCGGAGAACCAAACAGTGCGTATGGGCGTTGCAGTTGGTCGCACGTCAACTGAAGCGCCGCGGCCTGACCCGACGACCGTGTCGCGCCGCTTGGATCGGCCCGGATTAGCTCGATTCGCGGTCGGGGACGCGGTCTGGCGCGACGACAACCGGTCAGGCATCCAGGACGCGGGAGAGTCGCCGGCCAGTGAGATCAGCATTCAACTGCTCGACGTGGATGGCGAGGTTGTCGCCTCAACAGTGAGCGGCCCATCGGGACGCTACGTATTTGACAACCTTCAGGCCGGCACGTATTCGGTGCGGTTCGCAGGCGTGCCAGAGGAGGTCCGACTGACGCCAGCAGCCGTCGGTGACGAGCTGGCCACCGACTCTGATCCGGACTGTTCCGGAGTGACACCACCCTTCACCCTGGGGGTGGGGGAACCCAATGTTCGACCAGCTGGCGCGACAGACGGGGTGGAGGCGGCGTACATCAATCCGACCATCGATGCCGGGATCACTCCGCTGCGTTATTCCGTCGGCGACCGAGTCTGGCTCGATCTGAACAGCGACGGCATCCAGCAGCCTGACGAGCCAGCTGCGTCGGCGACGGTCTCCTTGCTCACTGTCGATGGCAGTGTGGTCGCAACCGCCGCCACCGATGCGAGTGGTCGCTACCGCTTCTCCAATCTGCGATCCGGTCGTTATCGGCTCCAGTTCACCAACCTGCCAGCGCACCGCGCCTTGACGGCACGGGCGGCTGGTAGTGACCGAGCGCTGGACTCCGATCCTGATCCCGCGACGGGGATCACTCCGGTCTTCAAGTTGGCCCAGGGAGCCCTCAATCTCGCGCCGACCACCGACGCCAATGCCGGCCTGACCGACTTCGAAAATCAGACTCTGAACGCTGGCTTGGTGGGCGCGTACTCGGTCGGGGACACGGTATGGCAGGACAACGACGGCGACGGAGCACTCGGCCCCAGCGACAGCGGGGTAGCGGGTGTCACCGTCGAGCTCATGGACAGCGAATCGCATGTCCTCGGCACCGGGGTGACCTCCCCGACTGGGAGCTACAGCTTCGACCGGTTGCCGGCAGGCAGCTACAAGGTCCGGTTTAGCAAGGTGCCCCGAGGTCTCACATTCATCAGCCAGGATGCAGCCATCGACTCCGATGTTGACCAGAACGGAGAGACGGCAGTCTTCACGCTCGGGAGTGAGAACCCAGTCGAGAGCAGCATCGATGCCGGCCTCTCGTCGCCATCGAACCATCGTGGACCGCCGGACTCCAGCAGGCCGCCCGTTGATGCCGCACTGTCGACCAGCGGGTTTGCCCCGCAGCTTGCGATTGCCGGGCTGGCGCTGGCGATTGCGAGCACCAGTTGCCTCTTGGTCGCTCGGCGGCGGCGCAAGCTAGGACACTAG
PROTEIN sequence
Length: 596
VLRTLLRSTAALAGLITWVTVAVLPVPADAETTDGTLTVIVDRDVNGNGNYDGTVDQPQPGIEIAVTDASGHRVKGVTERDGRFVLAATSKLNGGRYFVVAEIPAPLSDLTPVPESSTFQPLSTTVDVTSENQTVRMGVAVGRTSTEAPRPDPTTVSRRLDRPGLARFAVGDAVWRDDNRSGIQDAGESPASEISIQLLDVDGEVVASTVSGPSGRYVFDNLQAGTYSVRFAGVPEEVRLTPAAVGDELATDSDPDCSGVTPPFTLGVGEPNVRPAGATDGVEAAYINPTIDAGITPLRYSVGDRVWLDLNSDGIQQPDEPAASATVSLLTVDGSVVATAATDASGRYRFSNLRSGRYRLQFTNLPAHRALTARAAGSDRALDSDPDPATGITPVFKLAQGALNLAPTTDANAGLTDFENQTLNAGLVGAYSVGDTVWQDNDGDGALGPSDSGVAGVTVELMDSESHVLGTGVTSPTGSYSFDRLPAGSYKVRFSKVPRGLTFISQDAAIDSDVDQNGETAVFTLGSENPVESSIDAGLSSPSNHRGPPDSSRPPVDAALSTSGFAPQLAIAGLALAIASTSCLLVARRRRKLGH*