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PLM3_60_coex_sep16_scaffold_55159_1

Organism: PLM3_60_coex_sep16_Aeromicrobium_marinum_64_8

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: 2..559

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator Tax=Agromyces subbeticus RepID=UPI0003B59844 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 181.0
  • Bit_score: 300
  • Evalue 8.40e-79
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJJ01218.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 185.0
  • Bit_score: 284
  • Evalue 6.70e-74
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 183.0
  • Bit_score: 275
  • Evalue 1.10e-71

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
CAGGCAAAGCTCGACCGCATCACCGCCGCGGCCGGCGAGCTCTTCGCGGAGCACGGCGTCGACGAGGTCACCACGCAGCAGATCGCCGACAAGGCCGACATCGGCACGGGCACCCTGTTCCTCTATGCCAAGACCAAGGGCGAGCTGCTCCTGCTCGTGCAGAACTCCGGCTACGTCGACGCCCTGGTCAACGGCAGGGCGGCCGCCGAGGGTATCCCCGACACCCTCGACGCCGTGATGGCGATCGTGCGCCCGGTCGTGGAATGCAACCGCATCCAGATCGACAACGGGCGCACCTACCTGCGGGAGATCGTCTTCGGCGATCCCGAAGAGCCGTACCACCGCGACGCTCTCGCCCTCACCGTGCAGACCGAGGAGGCGATCGCGACGGTGTTGCAACGCGACCGGCGCGCCAGCTCCGGTGACGCAGCCACGCTCGCGCACATCGTCTCCGCCATCATGTTCGTCAGCATGGCGGCCACGATCTACATCGCCCGCTCCGTCGACGAAATCCTCGACGACATCAGAAGCCAGGTACGCGTTCTCCTGCAGCACTAG
PROTEIN sequence
Length: 186
QAKLDRITAAAGELFAEHGVDEVTTQQIADKADIGTGTLFLYAKTKGELLLLVQNSGYVDALVNGRAAAEGIPDTLDAVMAIVRPVVECNRIQIDNGRTYLREIVFGDPEEPYHRDALALTVQTEEAIATVLQRDRRASSGDAATLAHIVSAIMFVSMAATIYIARSVDEILDDIRSQVRVLLQH*