ggKbase home page

PLM3_60_coex_sep16_scaffold_3497_14

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(12113..12787)

Top 3 Functional Annotations

Value Algorithm Source
CmpX protein bin=GWD2_Deltaproteobacteria_55_8 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 221.0
  • Bit_score: 313
  • Evalue 8.90e-83
TM helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 212.0
  • Bit_score: 144
  • Evalue 2.60e-32
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 221.0
  • Bit_score: 313
  • Evalue 1.20e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAATCCCGTTGTCACGGTCACCGGGTTTTGGGATGCGTTTATCACCAAGATCGCGGTGTTTCTGCCCAATTTGTTTTTCGCCATGGCGATCATTCTGCTCGGCTGGGTGATCTGCAACGTCATCAAACGTATCGTGGTACGGGTTTTAAAGCTTTGCCAGTTCGATCTTCTGGCGGAGCGTTCCGGCATCAAACAGATCCTCGATCGCGGCGGCATTCGCCAGTCGGCATCGGATATTCTGGGTTTGTTGGTATTCTGGTTTTTATTTCTGATTGCGATCGTGACGACCTTGGAGACGCTCAATTTGAGCGGCGCCACCGATACTCTGCACACGATCTATTTGTATATCCCCAAAATCGTTGCCGCCCTGGTGACGTTGATCCTCGGACTCTACTTCGCCAACTTCCTTGAGTCCGTCACGCGCGCTTCCTGCGCCAACGCCGGCTTGGAGCAGGCCGGTTCGATCGGCCGAACGGCTTACCTAGCGACCGCGATTTTTGTCGTTGCCGGCATCTTCGAGATCCTCGACATCGCCTCTGAAATTGTCATTTGGGCGTTTATTTTAGTCTTCGGCGCGGCTTGTTTGGCGCTCGCCTTGGCCTTCGGGTTGGGTGGGAGAGACGTTGCCGGGCGCTTCTTGGAAAAATGGTTAGAGCAGAAGAAAAGCGAATAG
PROTEIN sequence
Length: 225
MNPVVTVTGFWDAFITKIAVFLPNLFFAMAIILLGWVICNVIKRIVVRVLKLCQFDLLAERSGIKQILDRGGIRQSASDILGLLVFWFLFLIAIVTTLETLNLSGATDTLHTIYLYIPKIVAALVTLILGLYFANFLESVTRASCANAGLEQAGSIGRTAYLATAIFVVAGIFEILDIASEIVIWAFILVFGAACLALALAFGLGGRDVAGRFLEKWLEQKKSE*