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PLM3_60_coex_sep16_scaffold_16007_2

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(1034..2785)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 559.0
  • Bit_score: 887
  • Evalue 6.60e-255
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 604.0
  • Bit_score: 661
  • Evalue 1.70e-187
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 583.0
  • Bit_score: 917
  • Evalue 6.40e-264

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGAAGGAGGTCAAAAAGCTCATCGATTTGGGCAAGGAGAAGGGCTATCTCACTTACGATGACGTAAACGACATGTTGCCCGCGGAAGTCGTCTCGCCGGACCAGATTGACGACGTCATGTCGATCTTCGGCGAGATGGATATCGAGGTGGTCGACTCCAACCAGCGCGTGGCGCTCGGCGGCGGCAGCGGCGACGAGCTTGCCGAAGAAGAGGAAGACGAGAAGGAAGTGGAAAACGATGCCGACGGCGATGTCGTCGGCAAGACCGGCGATCCGGTGCGCATGTATTTGCGCGAGATGGGCACGGTGTCGCTGCTCAGCCGCGAGGGCGAAGTCGAGATCGCCAAGAAAATCGAAAACGGCGAAAACAAGGTCATCAACGAGGTCCTGACGAGTCCGTTGGCGCTTCGCTATATTCTCGATCTCGGCGAGAAGCTGGCGCAACATGAGATTCGCGTGCGCGAGATCATTAAAGAAGAAGGCGACGAGGAGAGCGAAAATTTTGAGGACGAAGAGGTTCACGAGAAGCGCCTCCTCGACCAGATCGGCAAAATTCGCCGCACCACCAACGATCGGGAAAAAATCAAGCGTCAACTCGAAAGCAAACGAGTCTCGGCGCGGCGGCGCGAAGTGCTCCTGGGCGGCGTCGCCAAGTATAACGACAAGATCATCAACGGCCTCAAAGACCTCCAGCTCAACCGCAAACAAACCGAAGCGATCGCCGACGGCCTTAAGCGCGCCATGGAGCGGATGCAAACCATGGAGCGGCGCATCAAAGACTTTGAGCATAGAGTCGGAAGACCGTCGGCGGAGATCTTAAAGCAGGTCGCCAACGCCGACGGACAGAAAAAATACTGGCCCAAGGTGATCAATTCGTTTCGCATGGGTCACGACGCGATCCTTAACATGGCCGAAGAAATTCGCGGCAACCGGCGCGATATTCGCCATATTGAAAAAGACTTGGAGATGCCGGTCGAGGAGATCAAGCGGCGCGTCTGGTCGATTATCGAAGGCGAGACCAGGGCGAATTTAGCCAAGAAAGAATTGATCGAAGCCAATCTACGTTTAGTCGTCAGCATCGCAAAAAAATATACCAACCGCGGTTTGCAGTTTCTCGACCTGATTCAAGAAGGCAATATCGGCCTGATGAAAGCCGTGGACAAGTTCGAATATCAGCGCGGCTACAAATTCTCCACCTATGCGACTTGGTGGATTCGCCAGGCGATCACCCGGGCGATCGCCGACCAGGCGCGGACGATTCGTATTCCGGTACATATGATCGAGACGATCAATAAATTAATCCGCACCTCGCGTTACTTGGTCCAAGAGATCGGCCGCGAGCCGACCCCCGAAGAGATCGCCACCAAGATGGAAATCCCCCTCGATAAGGTGCGCAAGGTTTTAAAGATCGCCAAGGAACCGATCTCGCTCGAAACCCCGGTGGGCGAGGAGGAAGACAGTCACTTGGGCGACTTCATCGAAGACAAACGGATCATCACGCCGTCCGACGCGGTGGTGAATATCAATCTACAGGAGCAAACGCGCAAGGTTCTCGCAACGCTAACGCCGCGCGAAGAGCAGGTTCTCCGCATGCGCTTCGGCATCGGCGAAAAATCCGATCATACTTTAGAGGAAGTCGGCCAGAAATTTACCGTCACGCGCGAACGCATCCGCCAGATCGAAGCCAAGGCGCTGCGCAAGCTGCGCCATCCGAGTCGCAGCAAAAGGCTCAAGAGTTTCATGGAGAACTGA
PROTEIN sequence
Length: 584
MKEVKKLIDLGKEKGYLTYDDVNDMLPAEVVSPDQIDDVMSIFGEMDIEVVDSNQRVALGGGSGDELAEEEEDEKEVENDADGDVVGKTGDPVRMYLREMGTVSLLSREGEVEIAKKIENGENKVINEVLTSPLALRYILDLGEKLAQHEIRVREIIKEEGDEESENFEDEEVHEKRLLDQIGKIRRTTNDREKIKRQLESKRVSARRREVLLGGVAKYNDKIINGLKDLQLNRKQTEAIADGLKRAMERMQTMERRIKDFEHRVGRPSAEILKQVANADGQKKYWPKVINSFRMGHDAILNMAEEIRGNRRDIRHIEKDLEMPVEEIKRRVWSIIEGETRANLAKKELIEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIATKMEIPLDKVRKVLKIAKEPISLETPVGEEEDSHLGDFIEDKRIITPSDAVVNINLQEQTRKVLATLTPREEQVLRMRFGIGEKSDHTLEEVGQKFTVTRERIRQIEAKALRKLRHPSRSKRLKSFMEN*