ggKbase home page

PLM3_60_coex_sep16_scaffold_24572_6

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(4319..5308)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 329.0
  • Bit_score: 388
  • Evalue 1.20e-105
1-deoxy-D-xylulose-5-phosphate synthase 1 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 329.0
  • Bit_score: 516
  • Evalue 1.70e-143
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 329.0
  • Bit_score: 527
  • Evalue 8.10e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
AAAGAAAAAGGACCGATTCCCACCTACACCGATATTTTCGGCCAGTCGCTGCTGCGGCTCGCCAAAGATAATCCCAAAGTGGTGGGCATCACCGCGGCCATGGGCAGCGGCACGGGCATCGATAAGTTGCAACGCGAATTGCCCAAGCGCACCTACGATGTCGGCATCGCCGAGCAACACGCCGTGACATTTGCCGGCGGCATGGCGACTGAAGGCTATGTTCCCGTGGTAGCGATCTACTCGACGTTTTTACAGCGCGGCTACGACGAGATTCTCCACGACGTGTGCTTGCAGAATTTACACGTCGTCTTCGCCCTCGATCGCGGCGGCTTGGTTGGCGCCGATGGACCGACGCACCATGGAGTCTTTGACATCGCCTACATGCGGTCTATGCCCAATCTCGCGATCATGGCGCCCAAAGACGAGAACGAGCTTCAGCATATGCTCAAGACCGCGATCGATCATTCGGGACCGATCTCGCTCCGTTATCCGCGCGGCGAAGGTTGGGGCGTGGCGCTCGATAGTGAAATGAAAAGTTTGCCGATCGGTAAAGCCGAGCTGCTGCGCGACGGCAGCGATGTCGTCATTGCCGCCATCGGCCAAACGGTTTTGCCGGCATTGAAGGCGGCGCAAGAACTCGCGCCGCTCGGCATCAACGCTGCCGTGGTCAATGCCCGCTTCGTCAAGCCGCTCGATGGTGAGCTGTTTGGCGCTTTGCTTCGCCGCATTCCTAGACTCATCACCGTCGAGGATCATGTCATCGCCGGCGGCTTTGGCAGCGCGCTCATTGAGTTTCTCGCCGATAAGAATATCACCGGCGTCGAGATCAAGCGGCTTGGCGTGCCGGACCGCTTTATTCCGCACGGCACCCAAGACGAACTTAGAAAAATTTGCGGTTTCGACAAAGATGCCATCGCTCAGGCGGCCTTGCAAATCATGCGCCGTGCTAAGAAAAAAAGTAGAGAGGGATGGGAAAGAGGCAGCGCCTAG
PROTEIN sequence
Length: 330
KEKGPIPTYTDIFGQSLLRLAKDNPKVVGITAAMGSGTGIDKLQRELPKRTYDVGIAEQHAVTFAGGMATEGYVPVVAIYSTFLQRGYDEILHDVCLQNLHVVFALDRGGLVGADGPTHHGVFDIAYMRSMPNLAIMAPKDENELQHMLKTAIDHSGPISLRYPRGEGWGVALDSEMKSLPIGKAELLRDGSDVVIAAIGQTVLPALKAAQELAPLGINAAVVNARFVKPLDGELFGALLRRIPRLITVEDHVIAGGFGSALIEFLADKNITGVEIKRLGVPDRFIPHGTQDELRKICGFDKDAIAQAALQIMRRAKKKSREGWERGSA*