ggKbase home page

PLM3_60_coex_sep16_scaffold_25410_1

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(2..247)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 120
  • Evalue 5.30e-25
putative transcriptional response regulator protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 90
  • Evalue 1.30e-16
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 82.0
  • Bit_score: 131
  • Evalue 5.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCAAACGAACTTATTTTGATAATCGAAGATAACGAGAAGAACCGTAAGCTCTGCCGCGACGTGCTGCAGGTGAAAGGTTATCGGACTATCGAGAGCGAGACGGCGGAGGAAGGGATTGATCTCGCGTGGAGCGAAGCGCCAGCGCTCATTCTCATGGACATCCAGCTGCCCGGTATGGACGGGATCACGGCGATGAAGCGGCTCAAGGCCGATGCGCAGACGAAAGCCATCCCGATCATCGCC
PROTEIN sequence
Length: 82
MANELILIIEDNEKNRKLCRDVLQVKGYRTIESETAEEGIDLAWSEAPALILMDIQLPGMDGITAMKRLKADAQTKAIPIIA