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PLM3_60_coex_sep16_scaffold_42106_2

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 956..1495

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 136
  • Evalue 4.40e-30
Pseudouridine synthase bin=GWF2_Lentisphaerae_57_35 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 173.0
  • Bit_score: 141
  • Evalue 4.80e-31
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 191.0
  • Bit_score: 185
  • Evalue 5.30e-44

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGCATCGTCTCGATATCGAGACTTCGGGTTTGATTCTAGTCGCGAAAACTCAACGAGCGTTTGACAGCTTGCGCACGCAATTCCGCCGGCGTGAAGTGAGCAAGACTTATTGGGCGTTGGTCTGGGGCGATACGCTCGATCGAGGGACAATCGACTTTCCGCTGGCGCATGACGGTTCGGACAAACGGAAAATGCGCGTGGTTAAATTAGCCGCAACCGGCAAGCCGCCACGCAGTTGGCGCGCGCTCACGGACTATCGAAAAATTGGCGCGGCGCAAGGAATGAGTTTATTGGAAATCGTCATGGCCACCGGCGTCACGCATCAAATTCGCGTCCACTTGACGGCGATCGGCTGGCCAATTGTCGGCGATGCTCTGTATGGAACTGAGGAAAAAGAAAGATTCGGATTACAAAGGCACTTTCTACACGCCAGAGGGCTGGAATTTCGCCATCCTGATTCTCAACGAACCGTGATGCTCGAAAGCAAGCTCCCTGGTGATTTGACGGAAGTGCTAGAGCGACTGGGGATAAGATTCTAA
PROTEIN sequence
Length: 180
VHRLDIETSGLILVAKTQRAFDSLRTQFRRREVSKTYWALVWGDTLDRGTIDFPLAHDGSDKRKMRVVKLAATGKPPRSWRALTDYRKIGAAQGMSLLEIVMATGVTHQIRVHLTAIGWPIVGDALYGTEEKERFGLQRHFLHARGLEFRHPDSQRTVMLESKLPGDLTEVLERLGIRF*