ggKbase home page

PLM3_60_coex_sep16_scaffold_2269_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 5198..9193

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 1341.0
  • Bit_score: 1733
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 1341.0
  • Bit_score: 1733
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=RPOC_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 1338.0
  • Bit_score: 1733
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3996
TTGCTCGACGTCAACTACTTCGACGAGCTGCGGATCGGCCTGGCAACGGCCGAGCAGATCCGCATGTGGTCCAACGGTGAGGTCCGCAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGAAGGACGGCCTGTTCTGCGAGAAGATCTTCGGCCCGACCCGCGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCATCTGCGAGCGCTGCGGCGTGGAGGTGACGCGGGCCAAGGTGCGGCGTGAGCGGATCGGCCACATCGAGCTGGCCGCCCCGGTCACCCACATCTGGTACGTCAAGGGCGTGCCGAGCCGCCTCGGCTACCTGCTCGACATGGCTCCGAAGGACCTCGAGAAGATCATCTACTTCGCGGCCAACGTGGTGACCTGGGTCGACGACGACCGCAGGCACGACGACCTGCCCCGGATCGAGACCGAGATCGCCCACGAGCGCGACCAGGTCGAGGTCGAGAAGCAGAAGCGCGAGGAAGAGGTCAAGGCGCATCTCGAGGCCAACCTGGCGGAGCTGGAGGCACAGGGAGCCAAGTCCGACCAGCGCCGCAAGGCCCGCAACGAGGCCGAGCGTGCGTTCAAGGACATCGCCCAGAAGGCGGCCGGCAGCGTCGAGCTGCTGGAGCGGGTCCTTGACATGTTCAAGAACCTCACCCCGAAGCAGCTGCTCGCCGACGACCAGTACTACCGCGAGCTGCGCGACCGCTTTGGCGAGTACTTCTCGGCCGGCATGGGCGCCGACGCCATGAAGGACCTGCTGCTGCGCGAGGGCATCGAGGAGGAGCAGGCGCGCCTGCGCGAGGTCATCGCGACCTCCAAGGGCCAGAAGCAGCAGCGCGCGATCAAGCGCCTGCGCGTGGTCAGCGCCTTCGTCGGCCGGCGCAACTCGCCGCTCGGCATGGTGCTCGACTGCATCCCGGTGATCCCGCCCGACCTGCGCCCGATGGTGCAGCTCGACGGTGGCCGCTTCGCCACCAGCGACCTGAACGACCTGTACCGGCGGGTCATCAACCGCAACAACCGGCTCAAGCGGCTGCTCGACCTGGGTGCGCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTCCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGTGGCCGGCCGGTCACCGGACCGGGCAACCGACCCCTCAAGAGCCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGGTCGGTCATCGTGGTCGGGCCGGAGCTGAAGCTCCACCAGTGCGGGCTGCCCAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTGATGAAGCGGCTGGTGGACCTCTCCTACGCACAGAACATCAAGTCGGCCAAGCGCATGGTCGAGCGGTCCCGGCCCCAGGTCTGGGACGTGCTCGAGGAGGTCATCCGCGAGCACCCCGTGCTGCTGAACCGGGCGCCGACCCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGGTGCTCGTGGAAGGCAAGGCCATCCAGATCCACCCGCTGGTCTGCAAGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCCCTCTCCGCAGAGGCGCAGGCCGAGGCACGCATCCTGATGCTGTCGACCAACAACATCCTGTCGCCCGCCAACGGCCGCCCGATCGCCGTCCCGACCCACGAGATGGTCCTCGGCATCTACTTCCTGACCTACAAGACACCCGCGGCCGGCGCCGCGAACGGGTCGAAGCCCTCGGCGAAGAAGGGCTCCCAGAAGAGCACCGAGGCAGCCGTCAACCTGCGGGCGTTCGGCTCGGTGGCCGAGGCGGTCATGGCCTACGACTTCAAGTCGGTCAAGCTCCAGGACCCCATCCTGCTGCGGCTGCCCGAGGGCAAGCGCGACCTGGAGGACGACGGCAAGGTCGAGACCACCGTGGGGCGGCTGCTGTTCAACGAGGCGCTGCCCGACGACTTCCCGTTCGTCAACGAGACGCTGCAGAACCGCGAGCTGTCGACCCTGGTCGGCCGCATCGCCGACCGCTACGACCAGACCATGACCGCCGAGGTCCTGAACAACATGAAGACCCTCGGCTTCCACTGGGCGTCGCGGGCCGGCGTGACCGTGTCCATCCAGGACGTGCTCAAGCCGCCGCGCAAGCAGCAGATCCTCGACGAGTTCGAGAAGCGCGCCGAGAAGGTCGAGTCCCAGTTCCGCAAGGGCATCATCACCGACGACGAGCGCCGGCAGGAGCTCATCGAGATCTGGACCGAGGCGACCGAGCGGGTCCGCGAGGACATGGAGGAGCGCTTCAGGCAGGAGCCCTTCAACCCCATCTACATGATGGCCACCTCGGGCGCGCGCGGGAACATGACCCAGGTCCGCCAGATCGCCGGCATGCGCGGGCTGGTCGCCAACCCGAGAGGCGACATCATCCCGCGGCCGATCAAGGCCAACTTCCGCGAGGGTCTGACCGTGCTCGAGTACTTCATCTCGACCCACGGCGCCCGCAAGGGGCTGGCCGACACCGCCCTGCGCACGGCCGACTCCGGGTACCTGACCCGGCGCCTGGTCGACGTGACCCAGGACGTGATCGTGCGCGAGCACGACTGCGGCACCGAGCGCGGCATCCCGGTCGCGACCGCGGTGCGCCGGCCAAGGCCAGGGGCGAAGGGCGAGTACGACTGGGTCCGGCCCCGGGCGGTCGAGAGCCAGGCGCTCTCGCGCATCCTCGCCGAGGACGTCGCCGTGCCCGACTCCAAGGCACACAAGGTGCTGGTCGAGGCGGGCACTGAGATCGACGACCTGGTCGAGGACGCGCTCGTCGAGCATGGCGTGGGCGAGATCCTCTGCCGCTCGGTGCTCACCTGCGAGTCCAAGGTCGGCGTCTGCCAGCTCTGCTACGGGCGCAGCCTGGCCACCAACCGGCTGGTCGACGTCGGCGAGGCGGTCGGCATCATCGCCGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACCATGCGGACGTTCCACACCGGCGGCATCGCCGGCGAGGACATCACCCACGGCCTGCCTCGCGTGGTGGAGCTGTTCGAGGCCCGCACCCCGAAGGGCATGACCCCGATCGCCGAGTTCTCCGGCCGCCTGGCCATCGAGCACGTCGAGAAGGGCGTCCAGGTGACGGTGACCTCCGACGAGGGCGAGGAGTGGACCGCGATCGTGCCGCGCCGGGCCCGGCTCCGGGTCGAGGACGGCCAGGAGATCGAGGTCGGCCAGCCGCTCATCGACGGCACCCCGAACCCCAAGGAGATGCTGCGGGTGCTCGGGATCCGGGCCACCCAGGTGCACCTGGTGGACGAGGTGCAGAAGGTCTACACCTCCCAGGGCGTGACCATCCACGACAAGCACATCGAGCTGATCGTGCGGCAGATGCTCAAGCGGGTCACCGTGCTCGAGGGCGGCGACACCGCGCTGCTGCCAGGCGAGCTGGTCGAGCGGGCCACGTTCGAGCGGGCCAACCGGGCGGCGCTGGAGGCCGGCGACACCCCGGCCAACGGCCGTCCCGAGCTGCTCGGCATCACCAAGGCGTCGCTCGCGACCGAGTCGTGGCTGTCGGCGGCCTCCTTCCAGGAGACCACCCGCGTGCTCACCGAGGCGGCCATCGAGGGCAAGAGCGACTCGCTGCTCGGCCTCAAGGAGAACGTGATCATCGGCAAGCTGATCCCGGCGGGGACAGGCATGGTGCGCTACCGCAGCGTCACCCCGATCCTGGCCGACATGCCGGCCACGGCCTACGCCATGGACGCGTTCGGCAACACCTACGAGAGCTACGACGGCGTGTACTACGGCGAGGACGGCAACCCGATCGGCACCGTCGAGGGCGGGGAAGGCGAGCTGGTCGAGGTCGACGCCGGCGCCGGCTACGTCGCGGAGGAGTTCGACGCCTTCGAGGAGTCGTAG
PROTEIN sequence
Length: 1332
LLDVNYFDELRIGLATAEQIRMWSNGEVRKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERIGHIELAAPVTHIWYVKGVPSRLGYLLDMAPKDLEKIIYFAANVVTWVDDDRRHDDLPRIETEIAHERDQVEVEKQKREEEVKAHLEANLAELEAQGAKSDQRRKARNEAERAFKDIAQKAAGSVELLERVLDMFKNLTPKQLLADDQYYRELRDRFGEYFSAGMGADAMKDLLLREGIEEEQARLREVIATSKGQKQQRAIKRLRVVSAFVGRRNSPLGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVMKRLVDLSYAQNIKSAKRMVERSRPQVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPVLVEGKAIQIHPLVCKAFNADFDGDQMAVHVPLSAEAQAEARILMLSTNNILSPANGRPIAVPTHEMVLGIYFLTYKTPAAGAANGSKPSAKKGSQKSTEAAVNLRAFGSVAEAVMAYDFKSVKLQDPILLRLPEGKRDLEDDGKVETTVGRLLFNEALPDDFPFVNETLQNRELSTLVGRIADRYDQTMTAEVLNNMKTLGFHWASRAGVTVSIQDVLKPPRKQQILDEFEKRAEKVESQFRKGIITDDERRQELIEIWTEATERVREDMEERFRQEPFNPIYMMATSGARGNMTQVRQIAGMRGLVANPRGDIIPRPIKANFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVTQDVIVREHDCGTERGIPVATAVRRPRPGAKGEYDWVRPRAVESQALSRILAEDVAVPDSKAHKVLVEAGTEIDDLVEDALVEHGVGEILCRSVLTCESKVGVCQLCYGRSLATNRLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGIAGEDITHGLPRVVELFEARTPKGMTPIAEFSGRLAIEHVEKGVQVTVTSDEGEEWTAIVPRRARLRVEDGQEIEVGQPLIDGTPNPKEMLRVLGIRATQVHLVDEVQKVYTSQGVTIHDKHIELIVRQMLKRVTVLEGGDTALLPGELVERATFERANRAALEAGDTPANGRPELLGITKASLATESWLSAASFQETTRVLTEAAIEGKSDSLLGLKENVIIGKLIPAGTGMVRYRSVTPILADMPATAYAMDAFGNTYESYDGVYYGEDGNPIGTVEGGEGELVEVDAGAGYVAEEFDAFEES*