ggKbase home page

PLM3_60_coex_sep16_scaffold_4723_25

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(24043..24390)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family Tax=Variovorax paradoxus B4 RepID=T1XBM0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 99.0
  • Bit_score: 85
  • Evalue 3.40e-14
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 99.0
  • Bit_score: 85
  • Evalue 9.80e-15
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 109.0
  • Bit_score: 95
  • Evalue 4.70e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 348
CTGCTCACCGTAGCGGTTGCCGAGCGGTCCTCGCTGGCCGAGGTGGCCCGGGCGGTCGGCGCCTCCCCCTTCCACCTCGCCCGGGTCTTCCACGCCCAGACCGGGACGACGATCCACGGCTACCGCAACCAGCTCCGGCTGCGCTACTGCCTCGAGCGGCTCTGCACCCCTGGGACCGACCTGACCGAGACGGCGCTCTCCTTCGGCTACTCGAGCCACGGCCACTTCAGCGACAGCTTCCGCGCCCTGTTCGGGGTGCCGCCCTCGCGCGTCCGCCACGCCGCGCAAGCCCGCGACATGAGGGAACTGCGCAGGATCCTGGAAGTCGCCCCGACGCCCGGCACCTAG
PROTEIN sequence
Length: 116
LLTVAVAERSSLAEVARAVGASPFHLARVFHAQTGTTIHGYRNQLRLRYCLERLCTPGTDLTETALSFGYSSHGHFSDSFRALFGVPPSRVRHAAQARDMRELRRILEVAPTPGT*