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PLM3_60_coex_sep16_scaffold_5463_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 3420..4673

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003722DF1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 415.0
  • Bit_score: 602
  • Evalue 1.80e-169
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK37888.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 416.0
  • Bit_score: 607
  • Evalue 7.80e-171
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 408.0
  • Bit_score: 601
  • Evalue 1.50e-169

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
GTGACGACCGAGCCGGGGGTCGAGGAGCTGCTGCGCCAGTTGACGCCGCAGGTGCTCGGGGCGCTCCTCCGGCGCTACGGCCTGTTCGACATGTGCGAGGACGCGGTCCAGGAGGCTCTGGTGGTCGCGGCCGTTCAGTGGCCGGAGCGGGGGATCCCGGAGAGCCCGCGCGGCTGGCTGGTCACTGTCGCCTCGCGGCGGCTGACGGATCAGCTCCGTAGCGAGTCCGCCCGCCAGCGCCGGGAGGAGACGGCCGCGGCCCTCTCGCCGTCCGACGGCCTGGTCGCGCCGGGCGCGGACGCGGACCTCCTGCCGGAGCAGGACGACACCCTCACGCTCTTCTTCCTGTGCTGCCATCCGTCGCTGTCGCCCGCCTCGCAGATCGCGCTCACCCTGCGCGCCGTCGGCGGTCTGACGACCGCGCAGATCGCCCAGGCGTTTCTGGTGCCGGAGGCGCCCATGGCCCAGCGCATCAGCCGGGCCAAGCAGCGCATCAAGTCCGCTGGTGCCCGATTCGGGATGCCGCCAGAGGACGAGCGGGGGGATCGGCTGCGGGTCGTGCTCCAGGTGCTCTACCTCATCTTCAACGAGGGTTATGCGGCCAGCTCGGGCCCAGACCTCCAGCGTGCCGACCTGACCATCGAGGCAATCCGCCTGGCCCGCGACCTCCGTCGGCTGCTCCCCGACGACGGCGAGGTCGCCGGGCTGCTGGCGCTCATGCTCCTGACCGACGCCCGACGCCGGGCACGCACCCAGCCCGACGGCAGCCTGGTCCCGCTCGCCGAGCAGGACCGCCGCCGCTGGGATGCCGATGCCATCGCAGAGGGTGTGGCGCTCATCAGGGAAACGCTGTCGCGGGCGGTCATCGGTCCGTACCAGCTCCAGGCGGCGATCGCCGCTGTGCACGACGAGGCGGCACGCGCCGAGGAGACGGACTGGCCCCAGATCCTGGCCCTCTACGAGCTGCTCGAGCGAGTCGCACCGAACCCGATCGTAACGCTCAACCACGCTGTGGCGGTCGCCATGGTGCACGGACCGCGGGCCGGCCTCGACCTGCTCGCCACCCTGGACGCGGACGACCGGTTGGCCGGGTACCACCGCCTGGACGCGGTTGGCGCGCATCTGCTCGAGATGGCCGGCGACACCGCCGCCGCGCGCGAGCGCTATCGGGCCGCCGCGCGCCGCACGACCAGCCTTCCCGAACAGCGCTACCTCGAGGCGCGGGCGGCCCGGCTCGGACGCGATGCGCGGTAG
PROTEIN sequence
Length: 418
VTTEPGVEELLRQLTPQVLGALLRRYGLFDMCEDAVQEALVVAAVQWPERGIPESPRGWLVTVASRRLTDQLRSESARQRREETAAALSPSDGLVAPGADADLLPEQDDTLTLFFLCCHPSLSPASQIALTLRAVGGLTTAQIAQAFLVPEAPMAQRISRAKQRIKSAGARFGMPPEDERGDRLRVVLQVLYLIFNEGYAASSGPDLQRADLTIEAIRLARDLRRLLPDDGEVAGLLALMLLTDARRRARTQPDGSLVPLAEQDRRRWDADAIAEGVALIRETLSRAVIGPYQLQAAIAAVHDEAARAEETDWPQILALYELLERVAPNPIVTLNHAVAVAMVHGPRAGLDLLATLDADDRLAGYHRLDAVGAHLLEMAGDTAAARERYRAAARRTTSLPEQRYLEARAARLGRDAR*