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PLM3_60_coex_sep16_scaffold_7621_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(4650..6071)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 464.0
  • Bit_score: 590
  • Evalue 1.10e-165
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003749F84 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 464.0
  • Bit_score: 595
  • Evalue 3.20e-167
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.1
  • Coverage: 491.0
  • Bit_score: 126
  • Evalue 1.60e-26

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
TTGCAACCACGGGTACTGACGGGCGAGACGCGGGTGTTCGAGAGCGAGTCGGCCCCGGCCGACCCGGCCGTCCTGGACCAGCTCGCCCAGGGCGTGGCAGGCGCCGACCTGGCCGCCCCGCCGGTGGTGCTGCCCGACTTCCACCACAAGCACGACATGGAGATGCCCTCGAGCATCGCGGTCGCCATCGAGGGCACGATCCGGTCGACCCTCACCAGCGCCTCGGTCAACTGCGGGATGGCGCTGATCGCGCTCGAGATGGACCGCCCCGGCCGGGCCGCCGTGGAGGACTTCTACCGCGGCGTGCGCGAGCGCTACCCCTACCCGACCACCAGGCGCCGCGACCTCACCCCGGCCGAGGTGCTGCGCGCCGCCACCGACGGAGCCCACTTCGCGGTCGAGCGGTGGGGCATCGACGAGGCGAGCCTGGCCCGCATCGAGGAGCGGGGGCGCATCGCCCTCGAGCCCTACGGCGGCGACGCGCGGGTCGCGCGCGAGCTGCCCTGGCTGTCGGTGCAGCTCTCGCGCCAGCGCTTCGGCACGATCGGCCCGAGCAACCACTTCGTGGAGCTGCAGCAGGTCGAGGAGGTGCTCGACCCGGCAGCGGCCGAGCTGCTCGGCGTCCGCCAGGACCAGGTCACCCTCCAGTACCACGGCGGCGGCGGCGTGCTCGCCGGGCAGGTCGGCCGCATGTTCGGCAAGCGGAAGAAGATCTCCCGCAAGGTCAAGGCCCAGATGCGGCTGCAGAAGCCGCTCTACCACCTGGCCACCGCCCGGTCGCTGGCCGAGCTGCGGCTGCGCCTGGCCCTGTACTTCTCCGACGGCTGCCCACCGGTCGAGCGCGCCAGCGCCGAAGGCGAGCGCCTGCTGCTGGCCACCGCGGCCGCCATGAACTACGGCTTCGCCTTCCGCATGGCCACCTACGCGAGCCTGTGCGGGCTGGCCGAGCGGTCGTTCGGCGCCCGCGGCCACCAGCTCGTGGTGGACTCGCCGCACAACTCCATCTACGAGGAGGAGGTCGACGGCAGGCTGGCCGTGGTCCACAGGCACAACTCCTGCCGCGCCTGGCCGGCGCCACGGATGGCCGGCAACCCGGTGTTCGGGCAGACCGGCCAGGCCGTCCTGCTCCCTGGCACCAACCGCACCTCCTCCTACCTGTGCGTGGCCGGGGACGGGGCCGCGGCGAGCCTGTACTCGGCCTGCCACGGCGCCGGGACCATGGTCGCCGACTTCGCCGCCCGAGGCGTCTCCCAGCCCGACCCCGAGGGGCGCTCGACCCTCAAGTTCAACTACCAGGGGACGGCCCCCGCCGAGGTCGCCCACCTCGACGACAAGGGCGTCGACGAGGCGCTCGGCATCCTGGTCCACCACGGCCTCGTCCGGCCGGTCGCCCGCATGCGGCCCTTCGCGGTGCTGAGTTGA
PROTEIN sequence
Length: 474
LQPRVLTGETRVFESESAPADPAVLDQLAQGVAGADLAAPPVVLPDFHHKHDMEMPSSIAVAIEGTIRSTLTSASVNCGMALIALEMDRPGRAAVEDFYRGVRERYPYPTTRRRDLTPAEVLRAATDGAHFAVERWGIDEASLARIEERGRIALEPYGGDARVARELPWLSVQLSRQRFGTIGPSNHFVELQQVEEVLDPAAAELLGVRQDQVTLQYHGGGGVLAGQVGRMFGKRKKISRKVKAQMRLQKPLYHLATARSLAELRLRLALYFSDGCPPVERASAEGERLLLATAAAMNYGFAFRMATYASLCGLAERSFGARGHQLVVDSPHNSIYEEEVDGRLAVVHRHNSCRAWPAPRMAGNPVFGQTGQAVLLPGTNRTSSYLCVAGDGAAASLYSACHGAGTMVADFAARGVSQPDPEGRSTLKFNYQGTAPAEVAHLDDKGVDEALGILVHHGLVRPVARMRPFAVLS*