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PLM3_60_coex_sep16_scaffold_9562_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(1327..1836)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 116
  • Evalue 2.20e-23
Shikimate dehydrogenase Tax=Thermus oshimai JL-2 RepID=K7QYX1_THEOS similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 116
  • Evalue 1.60e-23
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 139.0
  • Bit_score: 115
  • Evalue 7.60e-24

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Taxonomy

Thermus oshimai → Thermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 510
ATGCCGGTCGCCGCGGTGCTCGGCTGGCCGCTCGCGCACACTCTCTCTCCCCAGCTCCACGAGGCCGCCTACCGGGCGGCCGGCCTCCACGGCTGGCGCTACGAGGCGCGCCCGACCCGACCCGAGGAGCTGCCGGCCGCGCTCGGGCGGGTCCGCTCCGGGGAGCTGGCCGGGGTGAACCTCACCACCCCCCACAAGGAGGCGGCCGTCCCCCTGGTCGACCGGCTGGAGCCGCCCGCGGACGCGCTCGGCGCGGTCAACACCGTATGGCCGGCGGGTGGCGGCCTCGTCGGCGGCAACACCGACGTCGCCGGCGCCCTCTGGGCGCTCGACCACCAGCTCGGCCTGGCGGGCGCTACCTGGGACGGCACCGGGCCGGCCGTCCTGCTCGGCACCGGCGGGTCGCGCTCGTCGCCCGCCTGGCCGGCCCGGGCACGCTCGCCCGCGGCTGGCCGGCGGCCGAGGACCTGGTCGCGCAGGCACGGGTCGTGGTGCAGGCGACCACCCTGA
PROTEIN sequence
Length: 170
MPVAAVLGWPLAHTLSPQLHEAAYRAAGLHGWRYEARPTRPEELPAALGRVRSGELAGVNLTTPHKEAAVPLVDRLEPPADALGAVNTVWPAGGGLVGGNTDVAGALWALDHQLGLAGATWDGTGPAVLLGTGGSRSSPAWPARARSPAAGRRPRTWSRRHGSWCRRPP*