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PLM3_60_coex_sep16_scaffold_11862_2

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 264..920

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 Tax=Nocardiopsis sp. CNS639 RepID=UPI00036F84F5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 212.0
  • Bit_score: 195
  • Evalue 4.50e-47
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 212.0
  • Bit_score: 194
  • Evalue 2.20e-47
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 212.0
  • Bit_score: 194
  • Evalue 1.10e-46

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Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGTCCGAGTACAAGCTTGCCGCCGAACCCCGGTCGGACACCGGGAAGGGAGCCAACCGCCGCGCCCGCGCCGCCGGACGCGTGCCCGCCGTCCTCTACGGCCACGGCATGGCGCCCGAGCATCTGAGCGTCGGCGCCCGCGAGTTCGGTCACGCCCTGCGCACCGACGCCGGCGCCAACGTGCTGATCGAGCTGTCGGTCGGCGCGGACAAGCACCTTGCGCTGGCAAAGGAGGTCCAGCGCCACCCGGTCAGGGGCACCTTCACCCACGTCGACTTCCTGCTGGTCCGCAGGGGGGAGAAGGTGCACGTGCAGGTGCCGGTGCACCTGGTCGGCGAGGCGCCGGGCGTGCGCGAGGGCGGCATCGCCGACCAGGACCTCTACCTGGCCAACGTCGAGGCCGAGGTGACCAACGTGCCCGAGCAGATCGAGGCCGACGTCTCCGGTCTCGACATCGGCGACGTGCTGCGGGTGGCCGACCTGAAGGCGCCCGAGGGGGCCACCATCCTCGACGACCCCGAGGCCCCGGTCGTCTCCGTCGTTGCCCCCGCGGCCTTCGAGGAGCCCGAGCCGGCCGAGGAGGAGGCCGTCGAGGCGGCCGAGGGCGCGGAGGGGGCCGAGGCGGCGGCTGGGGCCACTGGCTCAGAGGAGGCGTAG
PROTEIN sequence
Length: 219
MSEYKLAAEPRSDTGKGANRRARAAGRVPAVLYGHGMAPEHLSVGAREFGHALRTDAGANVLIELSVGADKHLALAKEVQRHPVRGTFTHVDFLLVRRGEKVHVQVPVHLVGEAPGVREGGIADQDLYLANVEAEVTNVPEQIEADVSGLDIGDVLRVADLKAPEGATILDDPEAPVVSVVAPAAFEEPEPAEEEAVEAAEGAEGAEAAAGATGSEEA*