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PLM3_60_coex_sep16_scaffold_20476_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(2174..2674)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D3498 similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 162.0
  • Bit_score: 179
  • Evalue 1.50e-42
RNA polymerase {ECO:0000313|EMBL:KEG40021.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 168.0
  • Bit_score: 168
  • Evalue 6.30e-39
sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 165.0
  • Bit_score: 157
  • Evalue 2.20e-36

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Taxonomy

Streptomyces griseorubens → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGGCAGGCGAGCGGGAGTTCGACAGCTTCTACGCCGCCTGCTACCCGCGCCTGGTCGGCCAGCTCTTCCCCATCACCGGCGACCTCCACGAGGCCGAGGACGTCGTCCAGGAGGCGTTCGTGCGGGCGGCGGCCCGCTGGTCGCGGCTGCGCGCCTACGACGTGCCCGAGGCGTGGGTGCGCCGGGTCGCGATCAACCTGGCGGCCAGCGGGTTCCGCCGGACCAGGCGGCGGCTCGCGCTGCTTGCCCGCCTCGGCCCCCCGCCGGACGTGCCACCCCTGTCGGTCGACGGGATCGCCCTGGCCGACGCCCTGCGGCAGCTGCCCCTCTCCTACCGGCAGGTGCTGGTCCTGCACCACCTGGTGGGGCTGCCCCTCGAGGAGGTGGCCCGCCAGGTCGACGCCCCCGTCAGCACCGTGAAGGCGCGCCTGTTCCGCGCCCGCGCGGCCCTTGCCAAGCGGCTCGCCGTCGCGACCGAGGAGGCCGGCCATGTCCGTTGA
PROTEIN sequence
Length: 167
VAGEREFDSFYAACYPRLVGQLFPITGDLHEAEDVVQEAFVRAAARWSRLRAYDVPEAWVRRVAINLAASGFRRTRRRLALLARLGPPPDVPPLSVDGIALADALRQLPLSYRQVLVLHHLVGLPLEEVARQVDAPVSTVKARLFRARAALAKRLAVATEEAGHVR*