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PLM3_60_coex_sep16_scaffold_23594_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: 4808..5728

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 315.0
  • Bit_score: 258
  • Evalue 1.10e-65
tRNA pseudouridine synthase B Tax=Isoptericola variabilis (strain 225) RepID=F6FRY9_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 315.0
  • Bit_score: 258
  • Evalue 7.90e-66
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 315.0
  • Bit_score: 258
  • Evalue 2.20e-66

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGACCAGGGTGGGTGACGAGGGGGCGCCAACCACCAGGGCGGGCATCGACGGGGTGCTCGTCTGTGACAAGCCGGCCGGGGTGACCTCGCATGACGTGGTCGCCCGGGTGCGCCGCCTGGCAGGCCAGCGCCGGGTCGGCCACGGCGGCACCCTGGACCCGCCGGCGACCGGCGTGCTGGTGGTCGCGCTCGGCCGCGCCACCCGGCTGCTGCCCTACCTCCCCATGGAACCCAAGCGCTACCTCGCCACGGTCGCGTTCGGCGCCGAGACCGACACGCTCGACGCGGCCGGGACGGTGGTCGCGAGCGCCGACGCGTCGGCGCTGGACCGCGCAGCCGTCGAACTGGCCCTGGCCGGGTTCGTCGGTCCCGGCGAGCAGGTCCCGCCCATGGTCTCGGCGGTCAAGGTGGGCGGCGAGCGGCTCTACGCCAAGGCGCGCCGTGGAGAGACCGTCGCGCGGGCGGCCCGCCCCATCACGGTGCACGCCCTCGACCTGGTCAGCTTCGTCCCAGGCGACCCGCCGCTGGCCACCGTGGCGGTGGCCTGCTCGGGCGGCACCTACGTGCGCGCGCTCGCCGCCGACCTGGGGCGCACCCTCGGCTGCCTGGCGCACCTGGCCACCCTGCGCCGTACCGCCGTGGGCGGCTTCACGGAGCAGGCCGCGCACCCGCTCGACCGGCTGGAGGCGCTTGCCGCAGCGGGCGCGCTGGCAACGGCCGTGCTCGACCCGGCTGCTGCCATGGCCCCCGTGGGGCTCCGGCCGGTGTCCGGCGACCAGGCGGCCGCCCTGGCCACCGGCCGCGCCATCGACCCGACCGGCCGCGACGGCCCGGTCGCGGCCGTCGGCCCGGACGGCCGCCTGGTCGCGGTCGTCCAGGACAGCGCCGGCCGCGCCCGCCCCAAGGTCGTGCTGGCGTGA
PROTEIN sequence
Length: 307
VTRVGDEGAPTTRAGIDGVLVCDKPAGVTSHDVVARVRRLAGQRRVGHGGTLDPPATGVLVVALGRATRLLPYLPMEPKRYLATVAFGAETDTLDAAGTVVASADASALDRAAVELALAGFVGPGEQVPPMVSAVKVGGERLYAKARRGETVARAARPITVHALDLVSFVPGDPPLATVAVACSGGTYVRALAADLGRTLGCLAHLATLRRTAVGGFTEQAAHPLDRLEALAAAGALATAVLDPAAAMAPVGLRPVSGDQAAALATGRAIDPTGRDGPVAAVGPDGRLVAVVQDSAGRARPKVVLA*