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PLM3_60_coex_sep16_scaffold_26940_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(2..631)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein Tax=Frankia sp. BMG5.12 RepID=UPI000369CD1E similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 218.0
  • Bit_score: 245
  • Evalue 3.60e-62
Rhomboid family {ECO:0000313|EMBL:KJE19640.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 219.0
  • Bit_score: 247
  • Evalue 1.00e-62
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 244
  • Evalue 2.30e-62

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGATCGCCCTCATCCCGATCCACGACCAGAACCCGACCAGCCGGCCGGCGGTGGTGACCTACCTGCTGATCGCGGCCAACGTGGTGGTCTTCCTGCTCGAGCCGGTCACCTTCTCGGTCTCCGGCAACCAGGGCACCGCCGTCGCCGAGTGCCAGCAGATCGCCTTCTTCCGCAAGTACGCCGCGATCCCGCGCGAGCTCACCAGCAACGAGCCGCTGCCCGTCACCGCGGGGCCCCCGGCCGCGCCGAACCGCTGCCGGGCGGTCAGGCCCGACTACCAGAAGATCCCGTTCCTGTCGGTCATCTCGTCGATGTTCCTGCACGGCGGGTGGCTCCACCTGATCGGCAACATGCTGTTCCTGTACGTGTTCGGCAACAACGTCGAGGACCGCCTCGGCCGCATCCGCTACCTGCTGTTCTACCTCGTCTGCGGCTACGTGGCCGCGTACGGGTTCGCGCTCACCGACCCGACCAGCCAGGAGACGCTGGTGGGCGCGTCGGGCGCGGTGGCCGGGGTGCTCGGCGCCTACCTGGTGCTCTACCCGCGGGCGCGCGTCGTCAGCCTGTTGGTGATCGTGCCGCTCGTCCTGCCGGCCTGGGTCGTACTCGGGCTGTGGTTCGCGCTGCAG
PROTEIN sequence
Length: 210
MIALIPIHDQNPTSRPAVVTYLLIAANVVVFLLEPVTFSVSGNQGTAVAECQQIAFFRKYAAIPRELTSNEPLPVTAGPPAAPNRCRAVRPDYQKIPFLSVISSMFLHGGWLHLIGNMLFLYVFGNNVEDRLGRIRYLLFYLVCGYVAAYGFALTDPTSQETLVGASGAVAGVLGAYLVLYPRARVVSLLVIVPLVLPAWVVLGLWFALQ