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PLM3_60_coex_sep16_scaffold_85376_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(2178..2423)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W507_KINRD similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 72.0
  • Bit_score: 102
  • Evalue 1.90e-19
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 72.0
  • Bit_score: 102
  • Evalue 5.40e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS01896.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 72.0
  • Bit_score: 102
  • Evalue 2.70e-19

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Taxonomy

Kineococcus radiotolerans → Kineococcus → Kineosporiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
GTGCCCGCGGCCGACGACCCGAGCGACGCGGTGCTGCGGTCCTGGCAGGTCGAGGAGGCGCTTGGCCGGATCGGCAAGGAGCACCGCACCGTCATCGTGGAGACCTACTACCGGGGCCGGCCGCACGCGGAGGTCGCGGCCGACCTCGGGATCCCCGAGGGGACGCTGCGCAGCCGCCTGTACTACGGGCTGCGGGCTCTGCGAGTCGCGCTGGACGAGGTAGGCTGGTCAGATGATGGTCGATAG
PROTEIN sequence
Length: 82
VPAADDPSDAVLRSWQVEEALGRIGKEHRTVIVETYYRGRPHAEVAADLGIPEGTLRSRLYYGLRALRVALDEVGWSDDGR*