ggKbase home page

PLM3_60_coex_sep16_scaffold_7920_2

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 866..2464

Top 3 Functional Annotations

Value Algorithm Source
Microcin C transport system substrate-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDX0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 531.0
  • Bit_score: 965
  • Evalue 1.30e-278
Microcin C transport system substrate-binding protein {ECO:0000313|EMBL:ERF80599.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 531.0
  • Bit_score: 965
  • Evalue 1.90e-278
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 532.0
  • Bit_score: 958
  • Evalue 7.90e-277

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAACGACCCCGTGGATGTCTTGATCATTGGCGCTGGCGCGTCCGGCGCTGCTGTGGCGTGGTCACTTGCCGAGACCAAGATGCACCTCCTGTGCCTCGAACAAGGCGACTGGATGAATTCCGCCAATTATCCCAGCGCGGGGCGGGACTGGGAGGCGCGAGCCTATGGCGACTATTCACCCAGCCCCAACATTCGCGCGCGGCCCGAGGATTATCCCATCAATGACGACAACTCGCCGATCAAGGTTGTGAACTTTAACGGCGTTGGCGGCTCTACCATCATGTATACGGCGCATTTTCCGCGGCTTCACCCTTCGGACTTTCGCGTGCGCACGCTGGATGGCGTAGCCGACGATTGGCCGATTGATTATGACACCCTCGCGCCGTTCTTTGCCGAGAACGACCGGATGATGGGCGTCTCGGGGCTGTCAGGCGATCCAGCCTTTCCGCCGACGGAGCCTCCGATGCCGCCGCTGCCGCTTGGTCGCTCCGGCGCCCATCTGGCCAAGGCCATGAATAAGCTCGGCTGGCACTGGTGGCCATCCGATACGACGGTGGCAACCGTCGACTACGAGGGGCGCGCGCGATGCATCAATCTGGGCCATTGCACACCGGCCTGCGCGCAGGGCGCGAAGGCGAGCACTGACATCACCTATTGGCCGATCGCGCTGCGCGCCGGGGTCGAGCTGCGCACGCATTGCCGGGTGCGCGAGATCACGACCAACGAGCAAGATATGGCAACCGGCGTCGTGTACTACGACAAGGATGGCGTCGAGCAATTTCAACCCGCCGAAGTTGTTGTGATCGCCTGCAACGGCATCGGCACGCCAAGGCTGCTGTTGAATTCGGCTTCCGGTCGCTTTCCGAACGGGCTTGCAAACTCCAGCGGACTGGTCGGCAAAAACCTGATGTTCCATCCCTACGCTCAGCTTTACGGCTATGTGGACGAGCCGACCGACAGCAATCGGGCGCCGCCCACATGTCTGTGGAGCAAGCAGTTCTATGAAACGGATACTTCGCGCGGCTTCGTGCGTGGCTACGCGTTTCAATTCGGTCGCGGCATCGGACCGGTGACCGAGGCCATTACGAGTGAGGCCAAGGGTCTGTTGCCCTGGGGTGAAGGCCACCACGCCGCGTTCCGCCGGCTCAATGGCCACCGGCTCGGCGTGTCGGCAATCTGCGAGGACCTGCCGGAGGAGCATAACCGCGTGACGCTCGATCCCGTGCTGAGGGATAGCCATGGAATCCCGGCGCCGCGCGTCGACTACACGATCGGCGAGAACAGCGCGCGAATGCTCGAACACGGTATCGCGCGCGGCAAAGAGATTCTGGCCGCTGCGGGTGCCACCGACATCTGCATCAATTGCCCCATCCTGTATGGCGGCTGGCATCTGCTCGGGACGGCGCGCATGGGCCTCGACCCCAAACGTTCGGTGGTGAACGAATGGGGACGATCGCACGATGTGAAGAATCTGTTCATCGTCGATGGCAGTGTGTTTGTCACGTCGGGCGGCGTCAATCCGACATCCACCATTCAGGCCATCGCGCTCTATATCGCCGATCAGATGAAGCAGCGCCTTGCCAATCTGTTCGATTGA
PROTEIN sequence
Length: 533
MNDPVDVLIIGAGASGAAVAWSLAETKMHLLCLEQGDWMNSANYPSAGRDWEARAYGDYSPSPNIRARPEDYPINDDNSPIKVVNFNGVGGSTIMYTAHFPRLHPSDFRVRTLDGVADDWPIDYDTLAPFFAENDRMMGVSGLSGDPAFPPTEPPMPPLPLGRSGAHLAKAMNKLGWHWWPSDTTVATVDYEGRARCINLGHCTPACAQGAKASTDITYWPIALRAGVELRTHCRVREITTNEQDMATGVVYYDKDGVEQFQPAEVVVIACNGIGTPRLLLNSASGRFPNGLANSSGLVGKNLMFHPYAQLYGYVDEPTDSNRAPPTCLWSKQFYETDTSRGFVRGYAFQFGRGIGPVTEAITSEAKGLLPWGEGHHAAFRRLNGHRLGVSAICEDLPEEHNRVTLDPVLRDSHGIPAPRVDYTIGENSARMLEHGIARGKEILAAAGATDICINCPILYGGWHLLGTARMGLDPKRSVVNEWGRSHDVKNLFIVDGSVFVTSGGVNPTSTIQAIALYIADQMKQRLANLFD*