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PLM3_60_coex_sep16_scaffold_10901_4

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(1849..2460)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor (Sigma-70 factor family, ECF subfamily) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TS15_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 203.0
  • Bit_score: 349
  • Evalue 2.30e-93
RNA polymerase sigma factor (Sigma-70 factor family, ECF subfamily) {ECO:0000313|EMBL:CCE09253.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 203.0
  • Bit_score: 349
  • Evalue 3.20e-93
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 203.0
  • Bit_score: 340
  • Evalue 1.70e-91

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCAGAACGTCGTCGCCATCAACCCCGCAGCCGAACAAGGCATCATCGCTGCCCAGGCGACCTCGGATGAAATGCTGCTGGCAAGCATTGCCGGTGGCGGCCGAACCGCGATGCACACCCTTTACTCCCGTCACAATGTGCGGGTTTACCGTTTCGTCCTTCGCATCGTGCGCGACACCACCATGGCAGAAGACCTCGTCAGCCAGGTTTTCCTCGATGTGTGGCGCACCGCCAGCCAGTTCGAAGGCCGTTCCCAGGTTTCCACCTGGCTGCTGTCGATCGCCCGTTTCAAGGCGCTGACCGCGATGCGTCAGCGCCGGCACGAGGATATCGACCAGGAGGACGTGCTTGAAATCGCCGACGAGGCCGACACGCCCGAGGCTTCGCTGGACCGCAGCAACACCAGCGCCATTCTGCGCGCCTGCGTGGCCAAGCTGTCGCCCGCGCACCGCGAGATCATCAACCTGGTTTATTACCATGAGAAGTCGGTGGAAGAGGCCGGCGCGATCATCGGGATTCCCCAGAGCACGGTGAAGACGCGGATGTTCTATGCCCGCAAGCAGCTCGCTGACCTGCTCAGGGGAGCCGGCGTCGAAACCCTTGCTGCGTGA
PROTEIN sequence
Length: 204
MQNVVAINPAAEQGIIAAQATSDEMLLASIAGGGRTAMHTLYSRHNVRVYRFVLRIVRDTTMAEDLVSQVFLDVWRTASQFEGRSQVSTWLLSIARFKALTAMRQRRHEDIDQEDVLEIADEADTPEASLDRSNTSAILRACVAKLSPAHREIINLVYYHEKSVEEAGAIIGIPQSTVKTRMFYARKQLADLLRGAGVETLAA*