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PLM3_60_coex_sep16_scaffold_38944_4

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2426..3148)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator Tax=Verrucomicrobium spinosum RepID=UPI00017450B3 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 205.0
  • Bit_score: 194
  • Evalue 1.10e-46
PadR family transcripitonal regulator {ECO:0000313|EMBL:ETR75613.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 231.0
  • Bit_score: 332
  • Evalue 3.60e-88
transcriptional regulator, PadR-like family similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 230.0
  • Bit_score: 183
  • Evalue 7.20e-44

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
AAGATGCTCGCAAATCCCCTGGCGCTCGCGGTGCTCGCCTTGTGCTTCGAGTGCCCAATGCATCCTTACGAGATGGCGGCAACGCTCAAGCGTCGGCACAAACATGAGAGCATCAAGCTGCGTTACGGCACGCTCTACACCGTGATCGAGCTGTTGACCTCGCGCGGTTTGATCCGGTCGAAGGAAACGTCGCGCGGCGGCAGGAGACCCGAGCGCACGGTTTACGCTCTGACGCCAGCGGGGCGTGATTTGCTTCGGAACTGGATGCGGCATCTGTTGGCGGAACCGGCAAAGGAGTTTCCGCAGTTCGAGGCCGCGCTGTGTCTTCTGCCGGTGTTGCCGCCGGATGAAGCTGTCGCTTTGCTGCGCGACCGCCGGTCGCGGCTGGAAGAAAAACTCATGCACATGCAGGCCGAGCTCAAGGACATCCTCGGAAAGACTTTTGCGGAAGTCGCCGGAGCCGACGAAGAATTGCCCGCGCCGCTATTAGGCCTGAAATTTCCGGCAATCCTGGTCGTCGAAAACGAATTTCGCCTGACGCTGGTGAAGGCAGAACTGGATTTCGTAACCGAACTGGTACGCCGCATCACGGAACAAGGCTGGGGCCCAACCTCTTTGTGGCGAGATATGCAAGCCGGCTGCGAGCGAGAGTACCAGCGCGAGAATGATGCCGCGACGCAGGAAACTGCGTCCACAGCGGGCTCGTCGATGGAAGTTGGATGA
PROTEIN sequence
Length: 241
KMLANPLALAVLALCFECPMHPYEMAATLKRRHKHESIKLRYGTLYTVIELLTSRGLIRSKETSRGGRRPERTVYALTPAGRDLLRNWMRHLLAEPAKEFPQFEAALCLLPVLPPDEAVALLRDRRSRLEEKLMHMQAELKDILGKTFAEVAGADEELPAPLLGLKFPAILVVENEFRLTLVKAELDFVTELVRRITEQGWGPTSLWRDMQAGCEREYQRENDAATQETASTAGSSMEVG*