ggKbase home page

PLM3_60_coex_sep16_scaffold_3508_11

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 8616..9740

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHL17236.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 363.0
  • Bit_score: 374
  • Evalue 1.70e-100
family 1 extracellular solute-binding protein bin=GWC2_Chloroflexi_73_18 species=Ruegeria conchae genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 330.0
  • Bit_score: 365
  • Evalue 3.30e-98
spermidine/putrescine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 338.0
  • Bit_score: 328
  • Evalue 2.20e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mumia flava → Mumia → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGACGGCGACCGAGGACGACCTGTGTCGCATGGGTGCGTTCGGGTCTTCAACGACGACATGGAGGCTCGGACTGGTCCTTGCAGCGTGCAGTTCGGACGATGGAGGGGGGTCGGACGTCTCGCTCGAGGACCAGGAGATCGTGTTCGCGAATTTCGGCGCGTACACGCCCGCAGGCTTCCTCGAAGCGTTCACCGCGGAGACCGGCGCGGAGGTGACGCTCACCGAGTTCGTCAACAATGAAGACATGCTCGGCCGGCTCCAGGCGGCCGACGGTGCCGGCTTCGACGTCGTGATGGTCTCGGGGCCGTACATCCAGACGCTCGTCGACAACGGGTGGGTGGCCGAGCTCGACCATGGCCAGATCCCGAACCTCGAGAACCTGTACCCGGAGGCGACACAGCTCGAGTTCGACCCGGGCAACGTGTACTCGGTCCCCTACACGTGGGGGACGACCGGTCTGTGCTACCGGACGGACCAGGTCAACGAAACGATCGACAGCTGGCAGGACCTGTTGAACCCCGCTCCCGAACTCCAGGGCAAGATCACGATGCTCGGGACCGAGCGGTGGCTCCTCCAGCCCGCCCTGCTCTCCCTCGGGTACTCGATCAACACGCAGGACGAGGCCGAGATCGAGGAGGCCAAGGACCTCACCCTCGCGGCGAAGGACAACCTACTGGCGTTCGACGACACCGTGTTCTACGACAAGCTCGAGACCGGTGAGGCTCTGGTCGTCCACGCGTGGGACGGCTGGTGCAACTACGTCGGTCTGGACTTCGAGACCGGTGAGCAGGATCCGAACGTTCGTGGAGAGTTCGTCATCCCGAGCGAGGGCAGCGACGTCTTCGCCGACACGATGGTGATCATGGCGTCCTCGGAGAACCAGGAGGCGGCGCACGCCTTCATCAACTTCGTGCTCGAGCCCGAGAACCACGTTCAGGTGGCGAACCTCGTGCTGTACAAGGTTCCGAACGAGCCTGCCATGGCGCTGTTGGACCCGGCGGTCGTCGAGCTGTACCCGAACCTCGCCATCACACCCGAGGAGCTCCTGGCCTTCGAGACCGAGCTCGACCTCGGTGAAGCTCAGTCGATCTGGACCGAGGCGGCGACCGAGATCAAGTCCTAG
PROTEIN sequence
Length: 375
MTATEDDLCRMGAFGSSTTTWRLGLVLAACSSDDGGGSDVSLEDQEIVFANFGAYTPAGFLEAFTAETGAEVTLTEFVNNEDMLGRLQAADGAGFDVVMVSGPYIQTLVDNGWVAELDHGQIPNLENLYPEATQLEFDPGNVYSVPYTWGTTGLCYRTDQVNETIDSWQDLLNPAPELQGKITMLGTERWLLQPALLSLGYSINTQDEAEIEEAKDLTLAAKDNLLAFDDTVFYDKLETGEALVVHAWDGWCNYVGLDFETGEQDPNVRGEFVIPSEGSDVFADTMVIMASSENQEAAHAFINFVLEPENHVQVANLVLYKVPNEPAMALLDPAVVELYPNLAITPEELLAFETELDLGEAQSIWTEAATEIKS*