ggKbase home page

PLM3_60_coex_sep16_scaffold_1383_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(2339..2962)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 207.0
  • Bit_score: 362
  • Evalue 1.50e-97
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 208.0
  • Bit_score: 266
  • Evalue 3.30e-69
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 207.0
  • Bit_score: 372
  • Evalue 3.60e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCGCGATACCGCGACGCCAAGTGCCGGCTGTGCCGCCGCGAGGGCATGAAGCTCTTCCTCAAGGGCGCCCGCTGCTTCACCGACCGCTGCGCGATCGAGCGGCGCAACTACCCGCCCGGCATGCACGGTCTGCAGCGCGGCAAGCTGACGCCCTTCGGCGTGCAGCTGCGCGAGAAGCAGAAGGCCAAGCGGATCTACGGCGTGCTGGAGAGCCAGTTCCGCAAGTACTTCCAGTGGGCCGAGAGCCAGCGGGGCGTGACCGGCGAGAACCTGCTCCGGCTGCTGGAGCTGCGCCTGGACAACGTCGTGTACCGCATGGGCTTCGCGGCCTCGCGTCGCGAGTCGCGGCAGATGGTGGCCCACGGCCACTTCCAGGTGAACGGGCGCAAGGCCAACGTGCCCTCGTTCCTGACCAAGGTCGGCGACGTCGTGCAGCTGCGGTCGACCTCCAAGATGGGCCCACGCGTGGACGACAACGCCAACGCGGGCCGCGGTCAGATCCCGCAGTGGCTGGACGTCGATGTCAACGGCAAGAAGGGCGTCGTCCGGGGCCTGCCGCTCCGCGAGGACATCCAGATCCCCGTGTCCGAGCAGCTGATCGTCGAGCTGTACAGCAAGTAA
PROTEIN sequence
Length: 208
MARYRDAKCRLCRREGMKLFLKGARCFTDRCAIERRNYPPGMHGLQRGKLTPFGVQLREKQKAKRIYGVLESQFRKYFQWAESQRGVTGENLLRLLELRLDNVVYRMGFAASRRESRQMVAHGHFQVNGRKANVPSFLTKVGDVVQLRSTSKMGPRVDDNANAGRGQIPQWLDVDVNGKKGVVRGLPLREDIQIPVSEQLIVELYSK*