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PLM3_60_coex_sep16_scaffold_1963_2

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 961..1500

Top 3 Functional Annotations

Value Algorithm Source
Extensin Tax=Nicotiana tabacum RepID=EXTN_TOBAC similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 111.0
  • Bit_score: 73
  • Evalue 2.10e-10
Extensin; Cell wall hydroxyproline-rich glycoprotein; Flags: Precursor;; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana.;" source="Nicotiana tabacum (Common tobacco).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 111.0
  • Bit_score: 73
  • Evalue 3.00e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 129.0
  • Bit_score: 61
  • Evalue 1.80e-07

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Taxonomy

Nicotiana tabacum → Nicotiana → Solanales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 540
ATGAAGCGGGCGATCGTGCTACTCGCGGTCTCTCTCGTGCTGTGTGCGGCGATACTCCCGAGCCCTGCGTCGGCTGGAGGAAACAGGCACGGCGGCCACCGCGGCGGCCACGGCGGCCGGTGGTGGCCTGGCGCCATCGTCGGCGGCCTCGCGCTCGGCGCCGTCGCCGTGGTGACGGCGCCAATCTGGGCGCTATCCGCCGCGGCCGCATCAGTGGCAGAGGCACCGCCCGTGGTGTACGCACCGCCGGCGTATTCCGCGCCGCCGACGTACTACTCCGTTCCGCCGCCTTATTCCGCTCCGCCGATGTACTCCGCGCCACCGACCTACTCCGCGCCGCCGGCGTATGTGACGCCGCCCCCGACGAGCTACAGACAGGCGCCGAGCTACGCGCCAGCCCAAGTCCCCGCGGTCCAGCGCGAGGTCGTCTACGCTAATGGTCGGCACGTGCTCTACGGCGACGGCGTGTATCAGCCGTGGCAGTGGGTTTGGGTGCCGTCAGCCTCGCCGCCGCCTCCGGCGCCTCCCCCGCCGCACTAG
PROTEIN sequence
Length: 180
MKRAIVLLAVSLVLCAAILPSPASAGGNRHGGHRGGHGGRWWPGAIVGGLALGAVAVVTAPIWALSAAAASVAEAPPVVYAPPAYSAPPTYYSVPPPYSAPPMYSAPPTYSAPPAYVTPPPTSYRQAPSYAPAQVPAVQREVVYANGRHVLYGDGVYQPWQWVWVPSASPPPPAPPPPH*