ggKbase home page

PLM3_60_coex_sep16_scaffold_9110_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(4188..4928)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 246.0
  • Bit_score: 374
  • Evalue 8.00e-101
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 248.0
  • Bit_score: 225
  • Evalue 1.30e-56
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 379
  • Evalue 3.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCCGTCATGGGTGAGCCCGACGGGCCCCCGGTGCTATGCGGCGCGCCCGTGCTCGACACGATCGGCGCGCTCATGGCCGGTCAGGGCATCCTCACCGCGCTGCTCCACCGCGAGCGGACGGGGCAGGGCCAGCGTGTGGACGTCTCCCTGCTGAACGGCACGCTGCTGGCGCACATGGCGCGGCTGTCGATTTTTCTCGCGACGGGTGAGGAGCCGGGCCGCTGGGGCAGTGGTCATCCCTACATCGTGCCGTTCCAGGCGTTCGAGGCGCGTGACGGCTGGGTCTACGTGGCCGTGTGGATCGATCGGCTGTGGGCGCCGTTCTGCGAGGCGGTCGAGCGGCCGGCGGTGGCCACCGACGCGCGATTCGCCACCCGCGCCGATCGGCTGCGGCACCGCGCGGAGCTGACCGCGCTGCTGGCGGAGGTCTTCCGCGGGCGCACCGTCGCCGACTGGATGGCGCGCCTGGAGGCTCGCGACGTCCTCTGCGCGCCGGTCAACCGCTACGCCGACCTCCCCCACGACCCCCAGGTGATCGCGACGGGTCTGATCGTCGAGCAGGAGCACCCTCGGGCGGGCCGCTTCCGGACCCTGGACACGCCGATCCGCTTCGACCGGACCCCGGGCGGGATCCGGACGCCCGCGCCCGCGCTCGGTGAGCACACCGACGCCGTCCTCGGCGAGGCCGGCCTGGCGCCGGCCGAGATCGCCAAGCTCCGGGAGTCCGGCGTCGTGTAG
PROTEIN sequence
Length: 247
MAVMGEPDGPPVLCGAPVLDTIGALMAGQGILTALLHRERTGQGQRVDVSLLNGTLLAHMARLSIFLATGEEPGRWGSGHPYIVPFQAFEARDGWVYVAVWIDRLWAPFCEAVERPAVATDARFATRADRLRHRAELTALLAEVFRGRTVADWMARLEARDVLCAPVNRYADLPHDPQVIATGLIVEQEHPRAGRFRTLDTPIRFDRTPGGIRTPAPALGEHTDAVLGEAGLAPAEIAKLRESGVV*