ggKbase home page

PLM3_60_coex_sep16_scaffold_9110_6

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(4912..5346)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 137.0
  • Bit_score: 221
  • Evalue 3.00e-55
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 138.0
  • Bit_score: 153
  • Evalue 3.70e-35
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 1.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGCGGCGCTGCCTCTCACCGGCTATCGCGTGCTCGAGCTCGCGCACCTCATCGCGGGCCCCGCCTGCGGCATGTACCTGGCCGACATGGGCGCCGACGTCGTGAAGATCGAGCAACCGGCCGGCGGTGACGCCTCCCGTACCGTCTACGGCACCCAGCTCGGCGGCGAGAGCGCGGTCTTCGTGACGGTCAACCGCAACAAGCGCAGCGTGACCCTCGACCTGGCGCGGCCGGAGGGCCGGGCGGCGTTCGAGCGGCTGGTGGCGCGCGCCGACGTGGTGATCGAGGCGTATCGCGGCGGCGTGGCCGAGCGCCTCGGCATCGACTGGCCGCGGCTGGCGCCGCTCAATCCGAAGCTGGTCTACTGCTCGCTCTCCGCGTTCGGCCCCGAGGGACCGTGGCGCAACAAGCCCGGTGATGGCCGTCATGGGTGA
PROTEIN sequence
Length: 145
MAALPLTGYRVLELAHLIAGPACGMYLADMGADVVKIEQPAGGDASRTVYGTQLGGESAVFVTVNRNKRSVTLDLARPEGRAAFERLVARADVVIEAYRGGVAERLGIDWPRLAPLNPKLVYCSLSAFGPEGPWRNKPGDGRHG*