ggKbase home page

PLM3_60_coex_sep16_scaffold_12210_1

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(1..300)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor, TAXI family Tax=Bradyrhizobium sp. YR681 RepID=J2WCU9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 75.0
  • Bit_score: 83
  • Evalue 8.70e-14
immunogenic protein precursor similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 75.0
  • Bit_score: 82
  • Evalue 5.50e-14
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 75.0
  • Bit_score: 89
  • Evalue 2.20e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGACGGAGCACGCCCGGGTGGATCTGCGCGCTCGGCGCCGCGGCCACCGTGTTGGCGGCGGTGGTCTCGGCGGCTTGCGGCAGCCGCTGCGCCAGCGCGGCGGCGCCGGTGTGCAGGGCGAGGTCGCCTACGAGGTGCTGCGCGGCATCGGCCGGCCGCCGGCCGATCTACGGATCTTCGCCGCGATGTACTCGACGGCCGGAATGTTCGTCGTCCGCGCCGACTCGCCCGTCCGAGCCATCGCCGACCTGCGCGGCAAGCCGGTCGTCTTCGGCGCGCGCGGCTCGGGACTCGTGATC
PROTEIN sequence
Length: 100
MTEHARVDLRARRRGHRVGGGGLGGLRQPLRQRGGAGVQGEVAYEVLRGIGRPPADLRIFAAMYSTAGMFVVRADSPVRAIADLRGKPVVFGARGSGLVI