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PLM3_60_coex_sep16_scaffold_13447_3

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 1552..2160

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 195.0
  • Bit_score: 276
  • Evalue 1.40e-71
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 198.0
  • Bit_score: 140
  • Evalue 3.40e-31
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 202.0
  • Bit_score: 327
  • Evalue 7.50e-87

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGAGCGTGGCCCCGGGGCCGCGCGTCGACGCCGACGCCGAGCTCGTCGAGGCGCTGCGCCGCGAGGAGCCGGACGCCCCCGACCGGCTCGTCGAGCGGTACGGCGACCGCGTCTACCGGCTGGCGATGCGCATCACCGGCCTGAAGGAAGACGCCGAGGAAGCGGCCCAGGACGCGCTGTGGACCGCGGCCCGCAAGGTCCACATGTTCAAGGGCGAGTCGGCGTTCGGCTCGTGGATCTACCGGATCACCGCCAACGCGGCCTACCAGAAGCTGCGCACCCGCCGCCAGAAGGCGCCCGAGATCGCCCTGGAAGACGTGCTGCCCTCGCTCGACGGCGACGGCCGCCATTTCGAGCCCATGGACGACTGGTCGAATCGCGTCGACGAGCAGGCGCTGCAGGGCGAGCTGCGCCGCGTGCTGCAGCAGGCGATCGACGGCCTTCCGCCCGACTATCGGACCGCGCTCGTGCTGCACGACGTCGAGGGGCTGTCGAACCCCGACATCGCCGAGGCGCTCAGCATCAGCCTGCCCGCGGTGAAGTCGCGCGTGCACCGCTCGCGCCTGTTCGTCCGCAAGCAGCTCGCCGACTACCTGAAGACCGCGTGA
PROTEIN sequence
Length: 203
VSVAPGPRVDADAELVEALRREEPDAPDRLVERYGDRVYRLAMRITGLKEDAEEAAQDALWTAARKVHMFKGESAFGSWIYRITANAAYQKLRTRRQKAPEIALEDVLPSLDGDGRHFEPMDDWSNRVDEQALQGELRRVLQQAIDGLPPDYRTALVLHDVEGLSNPDIAEALSISLPAVKSRVHRSRLFVRKQLADYLKTA*