ggKbase home page

PLM3_60_coex_sep16_scaffold_14556_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(1833..2273)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Rrf2 family bin=GWA2_Methylomirabilis_73_35 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 146.0
  • Bit_score: 199
  • Evalue 2.10e-48
BadM/Rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 150.0
  • Bit_score: 121
  • Evalue 1.20e-25
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 146.0
  • Bit_score: 197
  • Evalue 8.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCGCATCTCGGCCAAGGGGGAGTACGCGATCAAGGCGATGCTCGATCTCGCCATGCATCGCGGGCGTCCGCTGGTGCCGATCCAGGCGATCGCCGGTCGGCAGGCGATTCCCCAGCGCTATCTCGAGCAGGTCCTGCTCGCGCTCAAGCGGGCGGGACTCCTGACCTCCAAGCGGGGTTCCACGGGCGGTTACCATCTCACCAAGGCCCCCGACGAGATCACGGTGGGTACGGTGCTGCGGGCGGTGGAGGGCGGCAGCGCGCCGTTCGAGGGGGCTCCGCAGGGGTGGCGCAACGGTCGCCACGAGCACGACCTCGGCGAGCTCTGGGAGGAGATCGGGGAGGCGGTGGCCGGCGTCGTCGACCGCTGGACCCTCGGCGACCTGGTGGCCCGGACCGAGCAACGCCGTGGATCCGCCCGGCCGATGTATCACATCTAA
PROTEIN sequence
Length: 147
MRISAKGEYAIKAMLDLAMHRGRPLVPIQAIAGRQAIPQRYLEQVLLALKRAGLLTSKRGSTGGYHLTKAPDEITVGTVLRAVEGGSAPFEGAPQGWRNGRHEHDLGELWEEIGEAVAGVVDRWTLGDLVARTEQRRGSARPMYHI*