ggKbase home page

PLM3_60_coex_sep16_scaffold_24569_6

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 3150..3611

Top 3 Functional Annotations

Value Algorithm Source
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 245
  • Evalue 2.70e-62
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3) similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 152.0
  • Bit_score: 152
  • Evalue 6.70e-35
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 154.0
  • Bit_score: 247
  • Evalue 7.50e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGGCGGAACCGAGATCCTCCAGCGCCTCGAGAGTCGGTTCGGCCCCGCGGTCCTCGAAACCCACGAGCGTCTCGGCGACGCCACCGCCCTACTCGAGCGGGGCTGGCTGTTCGAGACGTTGCAGTTCTGTCGCGACGAGCCGGCCCTCGGCTTCGACGTCCTCATGGACCTGACGGCGGTGGACTACCTCAAGTACCCGGGCCGCGAGGACGGGCCGCGCTTCGAGGTCGTCTACCATCTCTACTCGCTCCCGCACAACCACCGGGTGCGGCTGAAGGTGCGGGTGGACGAGGACGACGCCGTGGTGCCGACCGCCGTGCCGCTGTGGCCCATCGCCAACTGGCTGGAGCGCGAGGTGTGGGACATGTTCGGCGTGCGCTTCGCCGGCCACCCCGACCTGCGCCGCCTGCTCATGTACGAGGAGTTCGTGGGCCACGCGCTGCGCAAGGACTACCCGATC
PROTEIN sequence
Length: 154
MGGTEILQRLESRFGPAVLETHERLGDATALLERGWLFETLQFCRDEPALGFDVLMDLTAVDYLKYPGREDGPRFEVVYHLYSLPHNHRVRLKVRVDEDDAVVPTAVPLWPIANWLEREVWDMFGVRFAGHPDLRRLLMYEEFVGHALRKDYPI