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PLM3_60_coex_sep16_scaffold_48877_1

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(112..696)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00035E7A19 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 179.0
  • Bit_score: 177
  • Evalue 1.10e-41
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EPD57970.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 177.0
  • Bit_score: 156
  • Evalue 2.20e-35
sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 1.30e-35

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Taxonomy

Streptomyces sp. HGB0020 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGAGGGCCAGCCGCCGCGGTTCGTGGAATGGGAGCGGGACCTGCGCGCCCGCCTGATGGCCGGGGACCCGCGCGCCCTGGCCGAGGCCTACGAGCAGTTCTCGCCCATGGTCTACGGCCTGGCGGCACGGGTCACCGGCGACCGCGCGGCCGCCGAGGACGTCACCCAGGAGGTCTTCCTCCACCTCTGGGAGCGGCCATGGGTGTTCGACCCCGACCGGGGGCGGCTGCGGGCCTGGCTGGCCACCATGGCCCACCACCGCTCGGTCGACCTCCTGCGCCGGGCCGAGGTCCGCGACCGCTACGCGACCCGGGCGGCCACGGCGCGCGACCCGGCGTCCCCTCCCAACCCGGAGGAGGCCGCGGTCGCCGCCGCCGTGGCCAAGCGGGTCCGGGTCGCCGTCGAGGAGCTGCCGGCCCCCCAGCGCACCGCCGTCCTGCTCGCCTACTACGAGGGCCGGACCTTCCGCCAGGTCGCCCGCCTCACCGGCGTCCCCGAGGGCACGGCCAAGTCCCGCCTGCGCCTCGGCCTGCGCCACATCGCCGACCGCCTCCAGTCCGAAGGCCTCGACGGCGAGTGGTGA
PROTEIN sequence
Length: 195
VEGQPPRFVEWERDLRARLMAGDPRALAEAYEQFSPMVYGLAARVTGDRAAAEDVTQEVFLHLWERPWVFDPDRGRLRAWLATMAHHRSVDLLRRAEVRDRYATRAATARDPASPPNPEEAAVAAAVAKRVRVAVEELPAPQRTAVLLAYYEGRTFRQVARLTGVPEGTAKSRLRLGLRHIADRLQSEGLDGEW*