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PLM3_60_coex_sep16_scaffold_703_7

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(6420..6953)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit Tax=Pseudomonas stutzeri NF13 RepID=M2VHV5_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 181.0
  • Bit_score: 121
  • Evalue 6.70e-25
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 181.0
  • Bit_score: 120
  • Evalue 4.20e-25
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 178.0
  • Bit_score: 137
  • Evalue 1.30e-29

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGTGCAGGAACCGGAGCCGGACGTCGTCCGGGCGGCGATGGCCGGCGACCTGGCCGCCTTCGAGTGGCTGGTCCGCTGCTACCAGGCGCATGTCTGGCGCTTCCTGCGCCATCTGCTCGGCGACGGCGCGCTGGCCGAGGACGTCACCCAGGAGACCTTCCTCCGCGTCTACCAGCACCTGCCCACCTTCGCCTGGCGCTCGAAGTTCTCGACCTGGGTGTTCCGGGTCGCCCGCAACGCCGGGATCGACGCGCTGCGCAGCCGCCGGCGCCACGACCAGCTCCTCCAGGTGCTACCGCGGCCGCAGCCCGAACCGGCGCCGGACGCGCGGGCCGAGGCGTGGGCGGCCGTGGCCGCCCTCAGCCCGAAGCTCCGTGAGGCGCTGCTGCTGGTGGAGGTGTTCGGCTTCACCTACAGGGAGGCGGCCCAGGTGCTGCGGATACCCGACGGCACCGTGAAGAGCCGCGTGTTCCATGCCCGGGTGCGGCTGACCGCCTGGCGGGACGAGGAGGGTCGAGCCGGTGAGGTGTGA
PROTEIN sequence
Length: 178
MVQEPEPDVVRAAMAGDLAAFEWLVRCYQAHVWRFLRHLLGDGALAEDVTQETFLRVYQHLPTFAWRSKFSTWVFRVARNAGIDALRSRRRHDQLLQVLPRPQPEPAPDARAEAWAAVAALSPKLREALLLVEVFGFTYREAAQVLRIPDGTVKSRVFHARVRLTAWRDEEGRAGEV*