ggKbase home page

PLM3_60_coex_sep16_scaffold_1022_19

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 16794..17162

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, putative ATPase, winged helix family Tax=Frankia sp. CN3 RepID=G6H9W7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 91.0
  • Bit_score: 83
  • Evalue 1.40e-13
afsR; afsR transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 105.0
  • Bit_score: 82
  • Evalue 5.10e-14
AfsR transcriptional regulator {ECO:0000313|EMBL:CCG04190.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 105.0
  • Bit_score: 82
  • Evalue 2.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGTCGTGGAGATGCGGGTGCGCTACCGGGTGCTCGGACCGGTCGACGCGGTCGACGCGGACGGCCGCCCGCTGCCGCTCGGCGGGGAGCGCCCGCTGGCGCTGCTGGCCGCCCTCCTCGCCCGACCGGGCGAGGTCGTCAGCAGCGACCGGCTGGCCCACCTGCTGTGGGGCGACGACCAGCCCGACAACCCGGCGGCGGCGCTGCACAGCCAGGTGGCGCGCCTGCGCCACGCGCTCCGCGCCGGCGACGGCCGCGGCGGCCCGGCTGCTCGCCGAGGCGCTGGCGCTGTGGCGCGGGCCGGCGTACGCCGGCTTCGCCGACCAGGAGGTCGCCCAGCTCGAGGCGATCCGGCGGCGACCGGGTGA
PROTEIN sequence
Length: 123
MVVEMRVRYRVLGPVDAVDADGRPLPLGGERPLALLAALLARPGEVVSSDRLAHLLWGDDQPDNPAAALHSQVARLRHALRAGDGRGGPAARRGAGAVARAGVRRLRRPGGRPARGDPAATG*