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PLM3_60_coex_sep16_scaffold_1024_12

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 10523..11200

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S1I6_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 211.0
  • Bit_score: 246
  • Evalue 1.80e-62
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 211.0
  • Bit_score: 246
  • Evalue 5.00e-63
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 205.0
  • Bit_score: 246
  • Evalue 2.50e-62

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Taxonomy

Actinoplanes missouriensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGCAGCCGTCGAGCCCGGCTCCCGGCCTCGGAGACGAGGTCGGCGAGGGGGGGCGCCCCGACGGCGCCCGCGTCCCGGCCGACGAGACCGCCGAGGTCCGCCGCCAGCGCTTCGCCGACGAGGCGATCCCCCTCCTGGACACCATCTACGCCGGCGCCCTGCGCCTGACCCGCAACCCGGCCGACGCCGAGGACCTGGTCCAGGAGACCTTCCTGCGCGCCTACAACGCGTTCCACCAGTTCGAGCCGGGCACCAACCTCAAGGCGTGGCTGTACCGCATCCTCACCAACGCCTACATCAACGCCTACCGCAGGCAGCAGCGGAACCCCCAGTCGGTGCCGACCGAGGACGTCGACGACTTCTCGCTGTACCAGCGGATCGCCAGCGCCAACCCGCACGGCGCCGAGACCCCCGAGGACGTGCTGCTCGACCAGATCCCCGAGGAGGAGGTACGCCAGGCCCTCGACGCGCTGCCGGAGCAGTTCCGGGTCGCGGTGCTGCTGGCCGACGTGGAAGGCTTCTCCTACAAGGAGATCGCCGACATCATGGGCACCTCGATCGGGACCGTGATGTCCCGGCTGCACCGGGGCCGGCGCCAGCTCCAGCGGCGGCTGTGGGAGTTCGCCGCCGACCGTGGGCTGCTCGAGGAGGGACAGGAATGGGTTCGCCCGAAGTAG
PROTEIN sequence
Length: 226
VQPSSPAPGLGDEVGEGGRPDGARVPADETAEVRRQRFADEAIPLLDTIYAGALRLTRNPADAEDLVQETFLRAYNAFHQFEPGTNLKAWLYRILTNAYINAYRRQQRNPQSVPTEDVDDFSLYQRIASANPHGAETPEDVLLDQIPEEEVRQALDALPEQFRVAVLLADVEGFSYKEIADIMGTSIGTVMSRLHRGRRQLQRRLWEFAADRGLLEEGQEWVRPK*