ggKbase home page

PLM3_60_coex_sep16_scaffold_1024_13

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 11182..11454

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 63.0
  • Bit_score: 55
  • Evalue 3.00e-05
anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 76.0
  • Bit_score: 52
  • Evalue 4.20e-05
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 59.0
  • Bit_score: 54
  • Evalue 7.20e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 273
ATGGGTTCGCCCGAAGTAGGCGGCTGCCACGACGTGCTCGGCTTCGTCTGGCTGTACCTGGACCACGAGGCACCGCCGACCACTTGCGCCGAGCTGGAGGCGCACCTGGCCGAGTGCCCGAGCTGCCAGCGGGCGGTCCGTTTCGACCGGCGCTTCAAGCAGCTCGTACGCCGCTGCGCCGACCCCGGCCCGGTGCCGAGCGGCGTGGTCGAGTCGCTCCGCCTGCGGGTGGAGCAGATCGTGCGCACCGACCCCCCGTCCCACCCCGCCTGA
PROTEIN sequence
Length: 91
MGSPEVGGCHDVLGFVWLYLDHEAPPTTCAELEAHLAECPSCQRAVRFDRRFKQLVRRCADPGPVPSGVVESLRLRVEQIVRTDPPSHPA*