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PLM3_60_coex_sep16_scaffold_161_28

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 27931..29250

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 471.0
  • Bit_score: 431
  • Evalue 9.80e-118
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 471.0
  • Bit_score: 431
  • Evalue 2.80e-118
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 439.0
  • Bit_score: 560
  • Evalue 1.50e-156

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1320
GTGCGATCATCCCACAGCCCCGATCTGATCAGCGTCACCTTCGACGACGACCATGCCGTCGCCGATGCTGGCCTGATCCTTGCCGCCAGCCTGGCCGAGGGACTCGGGCTGCGTGAGCTGTTCGATACTCACGTCGATCTCGGCGACGCGCCCGGCGCGGCCAACGCCGGCGACAAGGCGATGACCCTGCTCCACTCGGCCCTGGCCGGCGGTGAGTGGATCGGTGACGCCGACGCCTTGCGCGCCGGCGCGACCGGGCAGGTGCTGGGCCACCGTGTCGCCGCGCCGTCCACACTGGGCACGTTCCTGCGCTCGTTCACCTGGGGCTCGACCCGGCAGCTCGACCAGGTCGCCGGGATCGCATTGGCCCGCGCGTGGGCGGCGGGTACCGGGCCGGGGCCGTGGCCGGTGACCATCGACGTCGATTCCACCCACTGCGAGACCTACGGATTCCAAAAGCAAGGCGCGACCGGGATCGACCGGCATGGCGAGCGCGGCTACCACCCGCTGCTGGCCACCGTGGCCGGCATCGGCGACGTGCTCCACTCCCGCCTGCGCGAAGGGGTGGCCAACACCGGGCGCGGCGCGGCCAGCTTTGTCACCGAGACGATCAACCGGGCCCGCCGCAGCGGCGCCACCGGGCCGATCTGCCTGCGCGCCGACTCCGGGTTCTACACCCACAAGGTCATCGACGCCTGCCGCAAGCAGGGTGTGACCTGCTCGATCACCGTCAAGCTCACCAAGGCCGTCCGCAAGGTCATCGCCCAGATCCCCGAGCAGTCCTGGACACCGATCCCCTACTGGTTGGACGGCGGCGCCGACGTCGCCGAGACCAGCTACCGGCCCTTTGGCCGCAAGGGAAGGGTCATGCGCCTGATCGTGCGCCGCGTGCGGCCCACCCCCGGCTCCCAGCTCGCGTTGTTCTGCGACTACGACTACCACGGCTTTGTCACCGACCGTGAGGGCGCCATGCTGGCGTTGGAGGCCGACCATCGTCGCCACGCCGAGGTCGAAAACGTGATCCGAGACCTCAAATACGGCGTCGGCCTCAACCACCTACCATCCGGCAAGTTCGCCGCCAACGCCGCCTGGCTGGCCTTGAACGTCATCGCGCACAACCTGGCCCGCTGGACCAGCCGAATCGGCCTGGGCGAGACCCTCATCACCACCAAGACCCTACGGGTCCGCTACCTGGACCTGCCCGGCCGGCTGACCCGCTCCGCCCGACGCTGGCACCTGCACCTGCCCACCCGCTGGCCCTGGGCGCGCGAGTTCCTGCTGGCGCTGGACCGGCTGCGCTGCGTGCCGTTCCCGACCTGA
PROTEIN sequence
Length: 440
VRSSHSPDLISVTFDDDHAVADAGLILAASLAEGLGLRELFDTHVDLGDAPGAANAGDKAMTLLHSALAGGEWIGDADALRAGATGQVLGHRVAAPSTLGTFLRSFTWGSTRQLDQVAGIALARAWAAGTGPGPWPVTIDVDSTHCETYGFQKQGATGIDRHGERGYHPLLATVAGIGDVLHSRLREGVANTGRGAASFVTETINRARRSGATGPICLRADSGFYTHKVIDACRKQGVTCSITVKLTKAVRKVIAQIPEQSWTPIPYWLDGGADVAETSYRPFGRKGRVMRLIVRRVRPTPGSQLALFCDYDYHGFVTDREGAMLALEADHRRHAEVENVIRDLKYGVGLNHLPSGKFAANAAWLALNVIAHNLARWTSRIGLGETLITTKTLRVRYLDLPGRLTRSARRWHLHLPTRWPWAREFLLALDRLRCVPFPT*