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PLM3_60_coex_sep16_scaffold_1323_7

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(6478..7194)

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator Tax=Cupriavidus sp. WS RepID=UPI00036D955D similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 236.0
  • Bit_score: 247
  • Evalue 1.10e-62
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61451.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 235.0
  • Bit_score: 248
  • Evalue 8.90e-63
pcaR; Transcriptional ragulator, controlling aromatics degradation similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 235.0
  • Bit_score: 246
  • Evalue 5.20e-63

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGCTCCAGGTGTTCTCCCGCGAGCACCCGTCGGTGACGCTGAGCGAGGCGGCCGGCCTCACCGGCCTGACCCGCGCCACCGCCCGGCGCATCCTGCTGACCCTGCAGGACCTCGGCTACGTGCGGGCCGAGGGCCGCCGCTTCCTGCCGACGCCGCGGGTGCTCGCCATCGGCTACGCCTACCTGTCGTCGATGGACACCTGGCAGGTCGCGCAGCCCTACCTCGTCGAGCTGGCCGACCTGAGCCAGGAGTCGTGCTCGGCCGCCACCCTGGACGGCACCGAGGCGGTGTACGTCGCGCGGGTGGCGAGCCGCCGGGTCATGGCGGTCAACCTCAGCGTGGGCGCGCGGGTGCCCGCCTACGCGACCTCGATGGGCCGCGTCCTGCTCGCCGGGCTGGACGCCGGCCGGCTCGACCGCTACTTCGGGGCCGTCCGGCTGACGCCGCTCACCGACAGCACCGTCACCGACGAGGCGGCGCTGCGCGGGATCGTCGCCGAGGTCCGCGACCAGGGCTGGTGCGCGGTCGACCAGGAGCTGGAGGCCGGGCTGTCCTCGATCGCCGCACCCATCCACGACCGCGACGGCGAGGTCGTCGCCGCGCTCACCATCTGCAGCCACGCCGGCCGGGTCGGCGTGGAGCAGTTGCGCGAGGAGTTCCTCCCCCCGTTGCTGCACGCGGCCAAACAGGTCAGCGACCAGGTCCAGCGCCAGTAG
PROTEIN sequence
Length: 239
VLQVFSREHPSVTLSEAAGLTGLTRATARRILLTLQDLGYVRAEGRRFLPTPRVLAIGYAYLSSMDTWQVAQPYLVELADLSQESCSAATLDGTEAVYVARVASRRVMAVNLSVGARVPAYATSMGRVLLAGLDAGRLDRYFGAVRLTPLTDSTVTDEAALRGIVAEVRDQGWCAVDQELEAGLSSIAAPIHDRDGEVVAALTICSHAGRVGVEQLREEFLPPLLHAAKQVSDQVQRQ*