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PLM3_60_coex_sep16_scaffold_2135_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2825..4645)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator Tax=Actinomadura atramentaria RepID=UPI000363DE50 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 82.0
  • Bit_score: 71
  • Evalue 2.70e-09
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 74.0
  • Bit_score: 62
  • Evalue 4.70e-07
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 74.0
  • Bit_score: 62
  • Evalue 2.30e-06

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1821
ATGACCCTCGACGTGCATCCCGCCGGCATCCCCGCCGACCAGCCTGACCCCGAGCCGCCGGCCGATCCGCGGCCGGCGTGGGAGCGGATCGCCTACACCTGGCTGGCCCGCGAGGTCGACGCCGGCCAGCCCATCGACCCGGCCGAGTTGGCCCGCGAGGTCAGTGTGGCGCCTGGGTTCGCCCGCGACCTGCTGCGGCTGCTGCGCGCCCAGCGTGACCGGGACCCCGAGCTTGGGGAGCTGCGGGCGCGGTTGGTGCGTGACCGGATCGCCGACGCCTACCTGCGGCGGGAGCTGCACGGCGACCAGCGGCTTGACCCCAAGGAGCTGGCGGCCGAGGTCGGCACCTCGCCGGCGGTGGCCCGCCAGTGGCTGACCGGGCTGCGCGCCCAGCACGAAAGCCACCAGGGCCTGGAGGTGCTCACCCAGCCAGTCAGCCACGGCCAGCCCTCCCGAGGGCAGCTCGCGGGGTTGCAGGCGCACTATGCCGCCGGCGGCCACCAGCACGCCGCGGTCACCGGCCGCCCCGCCGACCCCGACCGGGTGACGGTGGAGGTGGAACGCCACTACTGGACCAGGGAGGTCCGCGCCGGCCAGCGGCTCCGTCCACTCCAGCTCGCGCGGGAGCTCGGCGGCGACCAACGCGTCATCAGCCAGCAGCTCGCCGAGCTGCGCGCCGGGCCGACCACCGCCGGGGAGCGCATCGAGCAGCTCTGGCACGCCCACCAGCAGGACCCCACGGTCCGGCCGCTCAGCTCCAGCCAGCTCGCCCAGCAGTTGGGCGTCTCCGACAGCTACGTGCGGCACGTCACCTGGCAGCTCCGCACCCGCCACGCGCAGCCGCCGCTGGGGGAGCGGCTGGCCGCCACCAACCAGCAGCTCACCAACCCACCACCACGAGCTGAGCGGGCCGACGGGGAGCGGGACTGGCGGCTGGATGCCGCCTGCCGGGATATCGACCCGGAGCTGTTCTTCCCGGAGACGGGGCAGGTCCCCCAGGCCGCGGCGGCCAAGGCGGTCTGCGCCGGCTGCGTGGTCCGCGGGCCGTGCCTGGAGGCGGCGGTGCACGGCCCGCAGGCCCGCGACGACCACACCGGCATCTTCGCCGGCACCACCGCCCGCGAACGCGTCCGCCTGCGCGGGCGCGCCTCGTACGCCGAGGGGACCCGGTTCGTCCACGACCGGGTCGCCGCCGAGGCGGCGCTGGCATTGGCCAACGAGAAGAGCATCGACCGGGCCGCCCGCGAGCTGGGCGTCTCCAAGCAGGCGCTCCGCCGCGCGTTCGACCACCACGGCCTACCGCAACCCCAGGTGTTTCAGGGTGGGCCGCGACGCACGCGGTTCTACGATGACCGTGACGCGGCCGAGCAGGCGTGGCGGCGCGCCGCCGAGGTGGGCATCAACCAGACCCGCAAGGAACTGGGCGTCTCCGACCGGGCGCTGCGCAACGCCTGGCAGCGGCACGGCCTAAGCCTGCCGCCACCGCTAACCAGCAGGCAGCCGGCGGCCACCCGGCGGCTGGATGCGGCCTTTGTGGCGCTCAACCGCAAGCTCCTCCCCACCCGGGCGCGCTCAAGTGAGGAGCTGGCCGCGCGGGTGCGTCGCGCCGAGGAGTACGCCACCTTGGGCGCCGACGTGGTGGTGGAGATGGCAGCGAAACCTACGGCAAGCGCCCAGCCGCCCGGGTGTGGGCGATCACCCGCCGCGCCCAACGCGCCCACCGCCGCACCAGCGACCGCCAAGGCCGCACCGAGCGCCGGCAGGCCGACCGCACCGACCGCACCGACCGCTCACGCGTCCAGGTCGAGGAGCGGGAGGTGA
PROTEIN sequence
Length: 607
MTLDVHPAGIPADQPDPEPPADPRPAWERIAYTWLAREVDAGQPIDPAELAREVSVAPGFARDLLRLLRAQRDRDPELGELRARLVRDRIADAYLRRELHGDQRLDPKELAAEVGTSPAVARQWLTGLRAQHESHQGLEVLTQPVSHGQPSRGQLAGLQAHYAAGGHQHAAVTGRPADPDRVTVEVERHYWTREVRAGQRLRPLQLARELGGDQRVISQQLAELRAGPTTAGERIEQLWHAHQQDPTVRPLSSSQLAQQLGVSDSYVRHVTWQLRTRHAQPPLGERLAATNQQLTNPPPRAERADGERDWRLDAACRDIDPELFFPETGQVPQAAAAKAVCAGCVVRGPCLEAAVHGPQARDDHTGIFAGTTARERVRLRGRASYAEGTRFVHDRVAAEAALALANEKSIDRAARELGVSKQALRRAFDHHGLPQPQVFQGGPRRTRFYDDRDAAEQAWRRAAEVGINQTRKELGVSDRALRNAWQRHGLSLPPPLTSRQPAATRRLDAAFVALNRKLLPTRARSSEELAARVRRAEEYATLGADVVVEMAAKPTASAQPPGCGRSPAAPNAPTAAPATAKAAPSAGRPTAPTAPTAHASRSRSGR*