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PLM3_60_coex_sep16_scaffold_4572_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 1154..1759

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PE35_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 193.0
  • Bit_score: 169
  • Evalue 3.20e-39
Sortase family protein, LPXTG-site transpeptidase {ECO:0000313|EMBL:EIV93319.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 204.0
  • Bit_score: 168
  • Evalue 7.60e-39
sortase (surface protein transpeptidase) similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 205.0
  • Bit_score: 166
  • Evalue 4.50e-39

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGGCGCCTTCGTCCTCTACTTCCTGGTGTACCAGCTCGTCGGCACGAACGCGGTGACCAACGCCGGCCAGTCCAGCCTGCGCAACCAGCTCCAGCGCGAGTGGTCGGCGCAGCCGGCGCCCCGCGGCGACCCCAAGCGGGCGGCGCCGCGGAAGGTGGCCCGCGGCAGGGGGCTGGCCGTCCTCGACATTCCCAAGATCCAGCTCGTGAACAAGGTGGTGGTCGAGGGCGTCGGCCGCGACGAGCTGCGCAAGGGTCCGGGCCACGTCCCCAGCACGGTGCCGCCGGGTCAGCCGGGCACGTTCGGGGTCTCCGGGCACCGCACCACCTACGGCGCGCCCTTCTACCGGCTCGACGAGCTGGAGAAAGGCGATACCATCACGCTCGTGACACGCGAAGCGATCTATACGTACACCGTCACGCGCACGGCCGTGGTCAAGCCGACCGACACCCAGGTGCTCGACAACGTCCGGGGGTCGAACGGCAGGCTGAAGCCGACGATCACCCTGACGACCTGCCATCCCCGGTACTCGGCCCGCCAGCGGCTGGTGGTCTTCGGCGACCTCAGCCTCACCTCGGCCAACACAGGCAAGGTGGCGGCATGA
PROTEIN sequence
Length: 202
MGAFVLYFLVYQLVGTNAVTNAGQSSLRNQLQREWSAQPAPRGDPKRAAPRKVARGRGLAVLDIPKIQLVNKVVVEGVGRDELRKGPGHVPSTVPPGQPGTFGVSGHRTTYGAPFYRLDELEKGDTITLVTREAIYTYTVTRTAVVKPTDTQVLDNVRGSNGRLKPTITLTTCHPRYSARQRLVVFGDLSLTSANTGKVAA*