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PLM3_60_coex_sep16_scaffold_4915_12

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 13263..14663

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 480.0
  • Bit_score: 410
  • Evalue 2.70e-111
Ribosomal protein S12 methylthiotransferase RimO Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDN3_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 496.0
  • Bit_score: 403
  • Evalue 1.80e-109
ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 480.0
  • Bit_score: 410
  • Evalue 5.40e-112

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGACGCCCCCCTCTCCGCCGACGACGGTGGCGATCGTCACGCTCGGCTGCGGTCGCAACGAGGTCGACTCCGCCAACGCCGCCGGGCTGCTGGCGGGCGCCGGGTACCGGGTGGTCGACGACCCCGAGGAGGCGGACGCGGTGCTGGTCAACACCTGCGCGTTCGTGGAGGCGGCCAAGCGGGAGTCGATCGAGACGGTGCTGGACGCCGCCGCCCTCCGGCAGACCGGGCTGGCCAAGAAGGTCCTGGTGATGGGCTGCCTCGCCGAGCGCTACACCGAGGAGCTGCGGGCCGAGCTCCCCGAGGTCGACGCGGTGGTGCCGTTCGCCGAGTACGGACGGCTCCCGGAGCTGCTCGGTCCGGCCCGGGCGCCGGTCACGACGCCCGCTCCGCCGCCGCTGCTGCCGCCGGGCCGGCGGGCGTTGCCGATGGTGTTCCCGACCCCGGCCGCGGCGGCGTTCCCGGCACGGGCCGCCCCACGGGGCTCCGTGGCCATGGTCAAGCTCGCCGAGGGCTGCGACCGGGACTGCTCGTTCTGCGCCATCCCGTCCTTCCGTGGGCCGTTCCGGTCCAGGCGGCCCACCGAGGTCCTCGCCGAGGTGGCCTGGCTCGCCGGGCAGGGCGTCTCCGAGGTCTGCCTGGTCGCGGAGAACTCCACCAGCTACGGCAAGGACCTCGGCGGCCGCGAGGCCCTGGTCCACCTGCTCCGCGACCTGGCCGGCGTCGACGGGCTGCGCCGGGTGCGCCTCAACTACCTGCAGCCCGACGAGCTCACCGGCGGCCTGCTCGAGGAGATGGCCGCCAGCCCCGTCGTCTGCAGCTACTTCGACCTGTCGCTGCAGCACGCCAGCGCGCCGGTGCTGCGGCGCATGCGCCGGGGCGGCTCCAGGGCCGCGTTCCTGGAGCTGGTCGCGCGCATCCGCGCCCTCGACCCCGACGCCGCCTTCCGCTCCAACTTCATCCTCGGCTTCCCCGGCGAGCGGGCCGCCGACGTCCGCGAGCTCGAGGACTTCCTGGAGGCGGCCCGGCTGGACTGGGTGGCGTTCTTCGCCTGGTCACCGGAGGACGGCACCGCCGCCCTCTCGCTGGACGGCCGCGTCCCGTCGCGGACCGCCCGCGCCCGGGTCGAACGCCTCCAGGAGTTGCAGGACCGCGTCCTCGGCGAGGTCCAGGCCGGCTGGGTCGGCCGCGAGCTGGAGGTGCTCGTCGAGCGGGCCGGCTCCCCGCCGGGCGTCGCCGCCGACGGCGACGGCGCCGCCGAGGGCCGCAGCTTCCGCGAGGGCGTCGACTGCGACGGCGTGGTGCGGGTCGAAGGCCACCAGGGGCGGGTGGGGGAGTACCTGCGGGTGGAGGTCACGGCCGCCGAGGGCCCGGAGCTGGTCGCCCGGCCCGCCCGGTAG
PROTEIN sequence
Length: 467
MTPPSPPTTVAIVTLGCGRNEVDSANAAGLLAGAGYRVVDDPEEADAVLVNTCAFVEAAKRESIETVLDAAALRQTGLAKKVLVMGCLAERYTEELRAELPEVDAVVPFAEYGRLPELLGPARAPVTTPAPPPLLPPGRRALPMVFPTPAAAAFPARAAPRGSVAMVKLAEGCDRDCSFCAIPSFRGPFRSRRPTEVLAEVAWLAGQGVSEVCLVAENSTSYGKDLGGREALVHLLRDLAGVDGLRRVRLNYLQPDELTGGLLEEMAASPVVCSYFDLSLQHASAPVLRRMRRGGSRAAFLELVARIRALDPDAAFRSNFILGFPGERAADVRELEDFLEAARLDWVAFFAWSPEDGTAALSLDGRVPSRTARARVERLQELQDRVLGEVQAGWVGRELEVLVERAGSPPGVAADGDGAAEGRSFREGVDCDGVVRVEGHQGRVGEYLRVEVTAAEGPELVARPAR*