ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM3_60_coex_sep16_scaffold_6628_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 4813..5652

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator Tax=Xanthomonas translucens DAR61454 RepID=L7GU40_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 247.0
  • Bit_score: 135
  • Evalue 5.40e-29
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 269.0
  • Bit_score: 132
  • Evalue 9.90e-29
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 244.0
  • Bit_score: 141
  • Evalue 1.80e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 840
ATGGGTGAGCGGCCCGGCAACCAACCACCACCAGTCATCGAGGCGGGCGTGCACCCGCCCGGGCTGCAGCGCCGCCACGTGGACCGGGTGCTCCCCGTCCACGAGCTGATCGTGGTGCAGGCCGGGACACTGCCCATCGCCGAGGACGACCACCACTTCGCCGTCCACCGCGACCACTGGGTGCTGCTGCGGGCCGGGCATCGCCACTACGGCTACGACGACCTGGACGATGCCACCTGGTTCTGCTGGGTCTGCTTTGGCGGCAGCCCGCCAGCCGGCGACCACCTCGACCGGGACGCCGTGGTCCTCCAAGCACCCCAGACCGGGCCGGTCGGCCGCCCAGAGCGCCTGCGCGTGCTGTTCGAGCAGCTCCTGGACGACCAGGACACCGGCCTGCTCACCCCAGCCACCGCCCGCAGCTACCTGCAGCTTGTCCTGGCCGAGATCCTGCGTGCGCCACCGGCCAGCGGCGCTGCGGCAAGCCGCCGACTAGCCAGGCGGGCAGCAGCATTCATCGCCGACCACCTCACCGACCCCGACCTTGGCACCGCGCGGATCGCTGACGCGCTTGCCTGCAATGCTGACTACCTCGGACGCCGGTTCCGGGAGGCGTTCAACCAGCCCCTCACCGACCGCGTCCATCAACAGCGGATCGACCGGGCACGGATGCTGTTTCGCTCCACCGACTGGCCCGTCGAGCGGGTGGCTGTCGAGGTCGGGTTCAGCGATGTGCGCTACTTCCGACGCATCTTCAAGCGCCGGGTCGGGCTCACGCCGGGGCAGTTCCAGCGCCTGCGTCGTTGGGGAACGTCGCCAACTCAGGGGGCACCGGCTGAATGA
PROTEIN sequence
Length: 280
MGERPGNQPPPVIEAGVHPPGLQRRHVDRVLPVHELIVVQAGTLPIAEDDHHFAVHRDHWVLLRAGHRHYGYDDLDDATWFCWVCFGGSPPAGDHLDRDAVVLQAPQTGPVGRPERLRVLFEQLLDDQDTGLLTPATARSYLQLVLAEILRAPPASGAAASRRLARRAAAFIADHLTDPDLGTARIADALACNADYLGRRFREAFNQPLTDRVHQQRIDRARMLFRSTDWPVERVAVEVGFSDVRYFRRIFKRRVGLTPGQFQRLRRWGTSPTQGAPAE*