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PLM3_60_coex_sep16_scaffold_7393_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1723..2760)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase Tax=Amycolatopsis mediterranei RepID=D8HM39_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 147.0
  • Bit_score: 89
  • Evalue 4.20e-15
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 147.0
  • Bit_score: 89
  • Evalue 1.20e-15
Lytic transglycosylase {ECO:0000313|EMBL:AEK40011.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 147.0
  • Bit_score: 89
  • Evalue 5.90e-15

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
GTGTCCCTACGCGCACGTCCCCGAACGCTGCTGTTGGCGGCCGCGGCCGCTGCCCTGCTGCTCCCCCATCCCGTCGCCAGCGGCGACGAGCGGGACCAGCTCCGGGAGACCTCCCGCCGGCTCGGGCAGGTCGAGTCGGTGCTGCGCAACGCCCGCGCCGAGGCCGGCGCGGTCGCGGCGGCCCTGGCAGACGCCGACCAGGAGGTCGCCGTGGGCAGGCGGCGCCTGGCACTCGCCGGCGCCCGCCTGGACGCCGCCAGGCAGCGGCGCGCCGGGGCGGCCGTCGCCCTGAACCAGGCGACCGACGAGGTCGATGCCCACGAGGTACGGCTGGCCGAGCAGGTCCGCGGCGCCTACATGACCGGCCGGGTCGCCGGCCTGGCCGCGGTGGTGGAGTCGGCCGACCTCAACGACCTCGTCCGCCGCACCGTCACCCTCAGCTACCTGCTCGCCGCGGACCAGGACGTGCTCGTCCGCCTCGACCTCGCCCGCCGGCGGGCCGACACGCTGCACGCCGGCATGGTCCAGGCCGAACGTGCCCGGGCGGCGGCCGCCGCCGAGGTCGCCGGCCAGGTCCGCGACCTCGAGCGGGTCCAGGCGCTCCGCCGGCAGGCCAAGGGCAGGCTCCACGCGCGGGTCGCCGCGCTGGCCGGAACCGCTGCCACCCTGCGTGCCCGGTCGGCCGAGCTCCGTGACCTGATCCGTCAGGAGGAGCTCGCCAGGCAGCGAGCGGCCGCCCAGGGCGGCGGCCGGGTGCCGACCGGATCGGGCGGGCGCTGCGACCTGTCGGGCACCTCGGCGGCCGAGCACTGGATCATCATGCACGAGTCCGGCGGCGACCCCACCGCCGACAACCCGACCTCGACGGCGTTCGGGTTGGGCCAGCTCCTGCTCGGCAACCGCATCCTCTACCTCGGCCAGGACTACGCGACGATCGACTGCGGCCGGCAGCTCTGGGCGTTCCGCGCCTACGTCCGCGACCGCTACGGGACCGCGGAGAACGCCCAGGCCTTCTGGCAGGCGCACGGGTGGTACTAA
PROTEIN sequence
Length: 346
VSLRARPRTLLLAAAAAALLLPHPVASGDERDQLRETSRRLGQVESVLRNARAEAGAVAAALADADQEVAVGRRRLALAGARLDAARQRRAGAAVALNQATDEVDAHEVRLAEQVRGAYMTGRVAGLAAVVESADLNDLVRRTVTLSYLLAADQDVLVRLDLARRRADTLHAGMVQAERARAAAAAEVAGQVRDLERVQALRRQAKGRLHARVAALAGTAATLRARSAELRDLIRQEELARQRAAAQGGGRVPTGSGGRCDLSGTSAAEHWIIMHESGGDPTADNPTSTAFGLGQLLLGNRILYLGQDYATIDCGRQLWAFRAYVRDRYGTAENAQAFWQAHGWY*