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PLM3_60_coex_sep16_scaffold_7393_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2917..3285)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I117_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 120.0
  • Bit_score: 79
  • Evalue 2.60e-12
Transcriptional regulator, SARP family {ECO:0000313|EMBL:CEL12691.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 113.0
  • Bit_score: 84
  • Evalue 1.10e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 120.0
  • Bit_score: 78
  • Evalue 9.70e-13

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGAGGTCCGTCTTCGCCAGGAGAGGTTTGGAGGAGGCTTCCGACCTGCTGCACAGCAGCCTCCAGATCTTCAAGGAGCTCGGCGATCGGCACTGGGAGGCAGTCACCAAGCGGAACCTTGGCGATGTCTGTCGTGGCCTCGAGCGCTTGGAGGAGTCCCTCGAGTGGTTCGATGCGGGCCTCTCCGTCTTCCGCGAGATCGGCGACCGCCTCTCCGAGGGGAAGACGCTCACCGGCCTTGGCAGGACAAGGGACCTGAACGGCGATGCGACCGCCGCCGCGGCAGCTTGGCGGGAGGCGCTGACCATCTTCCAAGAGCTGGGCGTGCCCGAGGCAGCGGAGGTTCGACGGCTGCTGGAGAGAACGTAG
PROTEIN sequence
Length: 123
VRSVFARRGLEEASDLLHSSLQIFKELGDRHWEAVTKRNLGDVCRGLERLEESLEWFDAGLSVFREIGDRLSEGKTLTGLGRTRDLNGDATAAAAAWREALTIFQELGVPEAAEVRRLLERT*