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PLM3_60_coex_sep16_scaffold_8049_8

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 6002..7849

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Streptomyces griseoaurantiacus M045 RepID=F3NGZ7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 154
  • Evalue 2.50e-34
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 154
  • Evalue 3.50e-34
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 159.0
  • Bit_score: 152
  • Evalue 3.50e-34

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Taxonomy

Streptomyces griseoaurantiacus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1848
GTGGTGCTGGTCGCCCTCGAAGTTCAGGACCACGTCGACCAGATGCTCGAGGGTCTTGGGCCCGGCGACCGCGCCCTCCTTGGTGACCTGGCCGACCAGGAAGGTGGCGATCGAACGCTCCTTGGCGAGCCGCACGAGCTGGGCGGCGACCTCGCGGACCTGGCCGACGCCGCCGGGGGCACCGGCCAGCTCGGGGTCGGCCACCGTCTGGACGGAGTCGACCACCACGACCTTGGGCCGGAGCTGGTCGACCAGGGCGCGCACCGCGCCCAGGTCGGTCTCGGCGGCCAGCAGCAGCCCCGGGTGCAGGGCCCCGAGGCGCTCGGCGCGCAGGCGCACCTGCTCGCGGGACTCCTCGGCGCACACGTACAGCACCGGGCCGTCGTCCGCCATCCCGGCCAGCACCCCGAGCAGCAGGGTCGACTTGCCGATGCCCGGCTCGCCGGCCAGCAGCACCACCGAGCCGGCGACCAGCCCGCCGCCGAGGACCCGGTCCAGCTCGCCGACGCGGGTGGGGCGGTGCGCGTCGGCCTGGGCGGCGACCTCGGTGATCGGTACGGGTGGCGCCACCGGACCAGCGGCCCTGGCCGGGGCGGTACGTTCGAGGACCTCCTCGACCAGGGAGTTCCAGGCGCCGCACGCGGGGCAGCGGCCGACCCAGCGCGGGCTGGCGGCGCCGCACTCGGTGCAGGCGTAGGCGGTTCGGACTGTCCTTGCCAAGCTCGAGAGCCCCCACCGTTGACGGCCCGACGCCCGGACCTCGGCCAGCAGGCTAGCACGCTGCCCCAACAGCCGGGCACGGTCCACAATGACGCCGTGGACGACGCACCGGAGCCTCGCGACCTTCTCGCGCTGCTGGCCGAGCCGGACCGGCTGAGGACCCTGGCCGCGGTGGCGCTTGGCGCCGCCACCCTGGCCGAGGTGGCCGAAACGGCGGGCCTGGAGCCGCGGGCGGCGGCCAGGGCGCTCAACCGGCTGGTCGCCGGTGGCCTGTTGCAGGGAGCGCCTCGCACGGGCTACGGCGTCCGCGTCGACGTGCTGCGGGCGGCGGCCAGGCGCCCGGCCGCCGACCGGGCGGACGGTGGCCAGGTCGGGTCCGACGTGGTCGGCCGCTTCCTGCGCGGCGACCGGCATGTGGCGATCCCGGCCGCCCGCGGCAAGCGGCTGGCGGTCCTCGACCATCTGGCCGGCCTGTTCGAGCCGGGCCGCCGCTACCCGGAGCGCGAGGTCAACGAGATCCTGCGCGCCTGGCACCCCGACTACGCCATGCTCCGCCGCTACCTGGTCGACGAGGGGAACCCTTGCCGCGGCTCGCGGGTGTCATCCCGGACCGACGCCGACGAGGAGCCCATGGCCTCCGACGACTTCGAAGCGTTCTACCTCGCGCACTACGGCCGTCTGGTCGGCCAGCTCCTCACCATGCTCGGAGACCTGGCCGAGGCCGAGGACGCCGTGCAGGAGGCGTTCGCGCGCGCCTCGGTCCGCTGGCGCTGGCTCGCCGCCTACGACGCCCCCGACGCGTGGGTCCGGCGGGTCGCGATCAACGTGGCCCGCAACAGCCTGCGCCGGGCCCGCTCGCGGCTGCGGGCGACGGAGCGGCTGCCGCCACCAGCCGCGGCGCCGGCGCCGACCGCCGAGCTGATCGATGTGCTCGCGGCCATGCGCCCGCTGCCGCTGCGGCAGCGCGAGGCGCTGGTGCTCCACTACGTGGCCGGGCTGCCGGTCGAGGAGATCGCCAGGCAGCTCCGGGTGCCGGCCGGGACGGTCAAGAGCCGGCTCGCCCGCGGCCGAGCGGCGCTGGCCCGGCGGCTCGGCGCGGCCGAGGGAGAGGAGGCATACCGTGCGTGA
PROTEIN sequence
Length: 616
VVLVALEVQDHVDQMLEGLGPGDRALLGDLADQEGGDRTLLGEPHELGGDLADLADAAGGTGQLGVGHRLDGVDHHDLGPELVDQGAHRAQVGLGGQQQPRVQGPEALGAQAHLLAGLLGAHVQHRAVVRHPGQHPEQQGRLADARLAGQQHHRAGDQPAAEDPVQLADAGGAVRVGLGGDLGDRYGWRHRTSGPGRGGTFEDLLDQGVPGAARGAAADPARAGGAALGAGVGGSDCPCQAREPPPLTARRPDLGQQASTLPQQPGTVHNDAVDDAPEPRDLLALLAEPDRLRTLAAVALGAATLAEVAETAGLEPRAAARALNRLVAGGLLQGAPRTGYGVRVDVLRAAARRPAADRADGGQVGSDVVGRFLRGDRHVAIPAARGKRLAVLDHLAGLFEPGRRYPEREVNEILRAWHPDYAMLRRYLVDEGNPCRGSRVSSRTDADEEPMASDDFEAFYLAHYGRLVGQLLTMLGDLAEAEDAVQEAFARASVRWRWLAAYDAPDAWVRRVAINVARNSLRRARSRLRATERLPPPAAAPAPTAELIDVLAAMRPLPLRQREALVLHYVAGLPVEEIARQLRVPAGTVKSRLARGRAALARRLGAAEGEEAYRA*