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PLM3_60_coex_sep16_scaffold_10119_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 4014..4664

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D3498 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 88.0
  • Bit_score: 95
  • Evalue 3.70e-17
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 86
  • Evalue 6.30e-15
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU76540.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 86
  • Evalue 3.10e-14

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCCCGTGAGCGACGACAGCTTCGCCGCCTTCTACACCGCGTCCTACCACCGGCTGCTCGGGCAGCTCTTCGCGGTCACCGGCGACCTTGCCGAAGCCGAGAACGTCCTCCAAGAGGCCTATGCCCGCGCCTTCGTCCGCTGGTCGCGGGTGCGCGCCTACGACCTGCCGGAGGCGTGGGTCAGGCGGGTGGCGCTGAACCTGGCCGGCATGGCCGCCAAGCGGCTGCGGCGCCGTGACGCCAAGGGAGCGCCACGGTGCATCGACGGCGTCGACTCGGTGGTCGACCAGCGCGCCGTCATCGAGCCGGCGCTGGTCGGCAACTTCTGGCCGCGGACCACCGACGTGACGGTCTTCCTCGTCGACGGCGCCAGCGCCGCCCAGCGCAGGGCGATCCGGGCCCGGCTGGAGGCGACCGGCGGCGTATGGCGGGTTTCCTACGAGTCGCCCGCCGACGCCCTCCGCGGACTCCGGGAGCGGTTCTCGGCCGAGCGGTTGCGACTCACGCCGGGCTCGCCGCCGGGCAGCTTCCGGGTCGCCCTGCGCGACCCAGGGGAGACGGGCGCGTTCGTGGACACGTTCTGCCGCGGCCGGCGCACCGGCGACTGCGCCGAGGGCGTCGCCATGGTGGTCGCGCACCCCCGCCGGTAG
PROTEIN sequence
Length: 217
MPVSDDSFAAFYTASYHRLLGQLFAVTGDLAEAENVLQEAYARAFVRWSRVRAYDLPEAWVRRVALNLAGMAAKRLRRRDAKGAPRCIDGVDSVVDQRAVIEPALVGNFWPRTTDVTVFLVDGASAAQRRAIRARLEATGGVWRVSYESPADALRGLRERFSAERLRLTPGSPPGSFRVALRDPGETGAFVDTFCRGRRTGDCAEGVAMVVAHPRR*