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PLM3_60_coex_sep16_scaffold_10660_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(4628..4813)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Pseudomonas aeruginosa HB15 RepID=V4MU85_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 49.0
  • Bit_score: 84
  • Evalue 2.40e-14
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 49.0
  • Bit_score: 84
  • Evalue 6.80e-15
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABR86272.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 49.0
  • Bit_score: 84
  • Evalue 3.40e-14

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
GTGAGCCACGAGCGGATCGACCGCCTCTACCGATCCGAGTCGCGCCGGGTCCTGGCCACGCTGATCCGCCTGCTGGGTGACTTCGACCTCGCCGAAGAGGCGCTGCAGGACGCCTTCATGGCGGCGATGGAGCAATGGCCCCGGGACGGCATCGATGCTCGGCGAGCTCGCCGCCCGACTCGATGA
PROTEIN sequence
Length: 62
VSHERIDRLYRSESRRVLATLIRLLGDFDLAEEALQDAFMAAMEQWPRDGIDARRARRPTR*