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PLM3_60_coex_sep16_scaffold_16758_5

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(2842..3144)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Salinispora tropica RepID=UPI0003744541 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 54.0
  • Bit_score: 59
  • Evalue 1.30e-06
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63417.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 54.0
  • Bit_score: 59
  • Evalue 1.90e-06
DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 56.0
  • Bit_score: 53
  • Evalue 2.10e-05

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGGTTCAAGCTGCTCCGGGAGAAGAACCAACCGTCGCCCTGAACCGTTGCAGTTAGCGTCACGGCGTGGCACCGTAGGCTACATGAGCCAGCAGCACCAGAACGGATCAAAGGGCGCGCCGGGACGGCCGCTGCTCAAGCCGGAAGAGGTGGCTGCGCGGCTCAACGTCAGCCTTCGCTTCATCCGCCGGCTCTGCCACGAGCGGCGCGTCCCGTATACCAAGGTTGGCAAGTTCGTCCGCTTCGACGCTGATGAGCTGGAGGCCTGGATCGCAACACAGCGGGTCGTCCCTCGGGACTGA
PROTEIN sequence
Length: 101
MGSSCSGRRTNRRPEPLQLASRRGTVGYMSQQHQNGSKGAPGRPLLKPEEVAARLNVSLRFIRRLCHERRVPYTKVGKFVRFDADELEAWIATQRVVPRD*