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PLM3_5_b1_sep16_scaffold_11826_5

Organism: PLM3_5_b1_sep16_Aeromicrobium_marinum_63_8

near complete RP 46 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: 2716..3183

Top 3 Functional Annotations

Value Algorithm Source
sigma factor, ECF subfamily protein Tax=Verrucomicrobium spinosum RepID=UPI0001745BA5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 154.0
  • Bit_score: 157
  • Evalue 5.70e-36
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04245.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 156.0
  • Bit_score: 243
  • Evalue 1.40e-61
sigma-70 region 2 domain protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 1.40e-59

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
GTGAACCTCGAAGAGCATCTTTTCCGGCGCGAGTCGGGCCGCCTCGTTGCGGCGCTGACGCGCATCTTCGGCGTGCACAACCTGGCGCTCGCCGAAGATGTCGCCCAGGACGCCTTCTGCCGGGCGCTCGAGGTCTGGAACTTGCGCGGCATTCCGGACAACCCGGCGGCGTGGCTGATGACGACCGCGAAACATCGCGCGCTCGACGTGCTGCGGCGCGATCGAACGGCGCGAACATTCGCTCACGAAGTCTCGCGCACGCTCGACGCCGAGCGCGAGCTGACAAGCGTCGTCGACGAGGCGTTCGCATTCGACAGCGTCCGTGATGAGCAGCTGCGCATGATGTTCTCGTGCTGCCACCCGCGCCTGCCGGAAGAGACGCAGATCGCGCTCATCCTGAATATTCTTTGCGGCTTTGGCGCCAACGAGATCGCGAGCGCGTTCCTTGCGGGGCGCGCGGCGATCGAG
PROTEIN sequence
Length: 156
VNLEEHLFRRESGRLVAALTRIFGVHNLALAEDVAQDAFCRALEVWNLRGIPDNPAAWLMTTAKHRALDVLRRDRTARTFAHEVSRTLDAERELTSVVDEAFAFDSVRDEQLRMMFSCCHPRLPEETQIALILNILCGFGANEIASAFLAGRAAIE