ggKbase home page

PLM3_5_b1_sep16_scaffold_483_9

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(13175..13609)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9UX13_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 129.0
  • Bit_score: 159
  • Evalue 1.40e-36
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN17097.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 129.0
  • Bit_score: 166
  • Evalue 1.60e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 129.0
  • Bit_score: 154
  • Evalue 1.60e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATCGCACCAGGCCGCTTCACGGTGATGATGCAGGTCATGGCGAGCGGTGCCCGTACCGCAGCCTCGGGCGGTTTCCGCGCGAGGCTGCGGTACGGACACGGCCAATGGGCCATCCTCCACGCAAGCCCGCTGATCGGTGGGGACGATGAACAGATCGCCGTCGCCATTGAGCCGGCAACCGGCGATCAGCTCATTGGGCTGCTGATCACGGCGTACGGTCTGACAGCGCGCGAGCGGGACATCTGCCGTGAGGTGATGGCCGGGCATTCGACCTCAGACATTGCCGGCCGCCTCTTCATCTCCAGCAACACCGTGCAAGATCATCTGAAGTCGGTGTTCGGCAAGGTCGGCGTACGCAGTCGTGGGGAGCTGGTCGCTCGGCTGCGGCCAGACGGCTCATCGCAGCCGGAGCGCGTGACTCAGTCCTTGATGTGA
PROTEIN sequence
Length: 145
IAPGRFTVMMQVMASGARTAASGGFRARLRYGHGQWAILHASPLIGGDDEQIAVAIEPATGDQLIGLLITAYGLTARERDICREVMAGHSTSDIAGRLFISSNTVQDHLKSVFGKVGVRSRGELVARLRPDGSSQPERVTQSLM*