ggKbase home page

PLM3_5_b1_sep16_scaffold_356_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2701..3078)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003805B2B similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 126.0
  • Bit_score: 102
  • Evalue 1.70e-19
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 126.0
  • Bit_score: 98
  • Evalue 1.20e-18
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADH67119.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 126.0
  • Bit_score: 98
  • Evalue 6.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCCCGGGCTGCGCCGTGGTGAGGTCGCGATGCTGGCCGGCGTCAGCGGCGAGTACTACACCCGCTTGGAGCGGGGCAACCTCGGCGGGGTGTGTCGGACACCGTGCTCGACGCCGTCGCGAACGCCCTTCAGCTCGATGAGGCCGAACGTGACCACCTGTTCGACCTCGCCCGGACCGCCGGTAGACCGACGAGGCGGTCCCCGAAGCAGTCGATGCCGAAGACGGTGCGGCCCGTGGTCCAACGCCTTTCTCGACGCGATGACCGGAGCCCCCGCATTGGTCCGCAACGCCCGCCTCGACATCCTCGCCGTCAACGCTTTGGGTTATGCCCTTTACTCCGAGGTGGTCGTCAATCCGGTCCGCCCGGCCGCGTGA
PROTEIN sequence
Length: 126
VPGLRRGEVAMLAGVSGEYYTRLERGNLGGVCRTPCSTPSRTPFSSMRPNVTTCSTSPGPPVDRRGGPRSSRCRRRCGPWSNAFLDAMTGAPALVRNARLDILAVNALGYALYSEVVVNPVRPAA*